Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02302 ATGTCCACAATGAAGAACAATTTCAAAGACCCAGatcaccaccttcatcatcatcatcatcTCTACTCCTCATGGAGTTTCTCAAAGCTAATGGCTTTCTTCTTCCTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTCAGATTCGTTAGCCACTCCTACGATTGCGATCACAATCATCACGAAGCCCTCCACATTCCCATCGCTCGTGAACAAATATCTCAGCAGGAGTCACCGCCATTTGAAGAAACCAACGTTTCGCACATAGTGTTCGGCATAGGAGCCTCAGCGAAGCTCTGGAAGCAGAGAAAGGAGTACATCAAGCTATGGTGGAGGCCGAGGGAGATGCGTGGCGTGGTGTGGTTGGAGCAGAAGGTGAAAACTGATCCTTCTGATGAGAGGTCCTTGCCCCCATTGAGGATCTCCAAGGACACTTCCAAATTCAAGTATAGGAACCCTAAGGGTCACAGGTCAGCTATTAGGATCTCGCGCATAGTGTCTGAGACGCTGAGGCTTGGGATGAAGGGTGTGAGGTGGTTTGTGATGGGGGATGATGATACCTTCTTTGTGGCTGAGAATTTGGTCAAGGTTTTGCAGAAATATGATCACAATCAGTTTTATTACATTGGGAGTTCCTCCGAGAGTCACTTGCAGAACATTTATTTTTCTTATAATATGGCTTATGGGGGTGGTGGATTTGCCATTAGTTATCCCTTGGCCGTGGCATTGGAGAAAATGCAGGATAGGTGCATTCAGAGGTATCCTGGGTTGTATGGCTCTGATGATAGGATTCAGGCTTGTATGGCAGAATTAGGGGTTCCACTCACCAAGGAGAAAGGGTTTCATCAGTTTGATGTGTACGGGAATCTGTTTGGGCTGCTGGCGGCCCATCCAGTTGCGCCCCTGGTATCCCTCCATCACTTGGACGTGGTAGAGCCCATATTTCCAAACGTGAGCCGGGTGGAGGCCCTGAAGCGGCTTAACGGGCCGATGAAGGTGGACCCGGCGGGGCTGATGCAGCAATCGATCTGCTACGACAAGGAGCGTAGCTGGACCGTATCGGTTTCGTGGGGCTACGCGGTTCAAATATTCCGAGGCATCTTCTCTGCCCGGGAAATGGAGATGCCGGCGAGGACGTTCTTGAACTGGTACAAGCGAGCCGATTACACCGCTTATCCCTTCAACACGCGCCCCGTCAGCCGTAACGTTTGTCAGAAACCATTTGTCTATTATTTCTCTAACGCACTGCTTCACGACAAGGCTTCTAATGAAACTGCAACTCAATACACCCGGCTTCAGCAGAACCCGCCTTGCAAGTGGAAAATGGAGGACCCCACCCAGATCAAACTCGTTGAGGTTTACAAGAAACCCGACCCGCTTTTGTGGGACAAGGCTCCTAGGAGAAATTGCTGTAGAGTTCGACGAACAAAAAAGAAAGGAAGTCTGGTGATTGATGTGGGGGAGTGCAGGGAAAACGAAGTTGTTGAATTGTAG 1494 0.4873 MSTMKNNFKDPDHHLHHHHHLYSSWSFSKLMAFFFLLISISYLFYSLRFVSHSYDCDHNHHEALHIPIAREQISQQESPPFEETNVSHIVFGIGASAKLWKQRKEYIKLWWRPREMRGVVWLEQKVKTDPSDERSLPPLRISKDTSKFKYRNPKGHRSAIRISRIVSETLRLGMKGVRWFVMGDDDTFFVAENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVAPLVSLHHLDVVEPIFPNVSRVEALKRLNGPMKVDPAGLMQQSICYDKERSWTVSVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRNVCQKPFVYYFSNALLHDKASNETATQYTRLQQNPPCKWKMEDPTQIKLVEVYKKPDPLLWDKAPRRNCCRVRRTKKKGSLVIDVGECRENEVVEL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02302 497 Gene3D - 76 327 - -
Cca01g02302 497 Pfam Protein of unknown function, DUF604 218 471 IPR006740 -
Cca01g02302 497 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 17 495 - -
Cca01g02302 497 PANTHER FRINGE-RELATED 17 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02302 Cca-Chr1 51483669 51487601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02302 6 492 Glycosyltransferase AT5G41460 63.830 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02302 - - gmx:100789583 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01937 07 46708602 46712587 Cca01g02302 01 51483669 51487601 PCT