Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01935 ATGGATGTAGAAGTGGTGCAAAAGCCACCTTCTCAACAAAAACATGGCAGGGTTCAATCTGCAATAAGGTTGTTAGTGATGGTTGTGTTTCTGGGTTGGATTTTCATATGGATAATGGCTCCTACAAACACTTACAAACAACAATGGAAGCCTTGGCTTCAAGCAAAGACTAGTTCTACCTTTGGCACACAAGGAGCATCACTTCTGGTTTACACTTTTCCAATGTTGTTCATAGCTGTTTTGGGATGTGTTTACGTCCACATAGCCAAAAAAGCAAACGGTTTCAGCATGGAAAGTAGTTATAGCAAGAAACATGAGATATCTATATGGAAGCGTTTGGTGCTTGTGAGAGGCCCTCTTGGCATAGTTTCAGTCACAGAAATGGCCTTCTTGATTATGTTCATTGTTCTACTAGTTTGGTCCTTTTCAGTTTACCTTCAGAATGGTTTTGCCCAAATCACCCAAAAATCAGCAGCAGAAAAAGGTGTAAAAGTTTGGGAGATGAAACTAGGCAGTGCAGGTGTGAGGTTGGGTCTGATTGGGAAGATATGTTTGGCATTCTTGTTTTTTCCAGTTGCTCGTGCTTCCTCGGTGCTGCCACTGCTTGGACTCACATCAGAGAGATGCATCAAATACCATATTTGGTTAGGACACTTGGCCATGACCCTTTTCACTGCTCATGGTCTTTGTCTCATCATCAAATGGGCACTTACTGGTCAACTTTCAAAGATGCTGGAATGGAAAAAAAATGGGATATCAAACGTAGCTGGAGAGGTAGCTTTGGTTGTTGGTTTGTTGATGTGGATTGCAGCCATCCCTCGCATTAGGCGAAAAGCTTTTGAGCTCTTCTTCTACACTCACTATCTCTACATTCTCTTCATTGTCTTCTTCATCTTTCACGTTGGCATGTTCCATGCATGCACTGTGCTCCCTGGTTTCTACCTCTTCTTGGTTGATCGTTTCCTAAGGTTTTTACAATCAAGATTGCGAGTTCGTTTGGTTTCTGCTCGTGTTTTGCCATGTCAAACTGTAGAACTCAACTTCTCCAAGAACCATGGTTTGACTTACAGTCCCACGAGTATAATGTTCATAAATGTACCAAGTATATCCAAGTTACAGTGGCATCCATTTACCATTACTTCTAATAGTAATTTGGAGCCAAAAATGTTGAGTGTTGTAATCAAAGGTGCGGGAACTTGGTCCCAAAAGCTCTACCAGATGCTTTCAACCCCTTCTGCAATAGATCATCTCAATGTCTCTGTTGAAGGTCCGTATGGACCTGCATCAACCAATTATCTAAGGTATGACACTATTGTGATGGTTAGTGGAGGGAGTGGAATCACCCCTTTTATCTCCATCATCCGGGAGTTAATGCATTTGACCTCAACATTCAAATATAAAATACCAAAAGTTATCCTAATTTGTGCATTCAAAAAATCTTCATATCTCTCAATGCTAGACTTAATCCTTCCAATATCTGGCACCCCCTATGATATTTCCAACATGCAATTACAAATTAAGGCCTACATCACAAGAGAGGAGGAGCATGAATTGAAAAGCCAAATTCACACTCAACAAATATGGTTCAAGCCTAAGGCAACAGATGCATCCATATCTGCTATTTTAGGTCCAAACAATTGGCTTTGGCTTTGTGCTATAATCTCATCCTCGTTCATAATTTTCCTTATCATAATTTTTATCATCACCCGATACATCATTTTCCCTAGAGACCATAATTCTCATAAAATGTTCTCACAACCTTTGAGTTCATTACTCAACATGTTAGCAATATGTGTGTCAATAGCAATGGCTGCTAGTGCAGCTGTTCTTTGGAACAATAAACACAATCACAAAGAAGCAAAGCAAATTCAGGAGTTAGAAGGATCATCAATTGATGAAAGAGATAAAGAACTAGAAAGCCTCCCATACCAATCCATTGTTCAAGCTACAAAGGTGCATTATGGTGTAAGACCTGATCTTAAAAGACTGCTATTTGAATTTAAAGGGTCAAGAGTGGGAGTTTATGTTTCTGGACCCAAGAAAATGAAGCAAGAAGTTGCTACCATTTGCTCATCTGATTTAGCTGAAAATTTGTATTTTGAGTCCTTTAGCTTTAATTGGTAA 2124 0.3969 MDVEVVQKPPSQQKHGRVQSAIRLLVMVVFLGWIFIWIMAPTNTYKQQWKPWLQAKTSSTFGTQGASLLVYTFPMLFIAVLGCVYVHIAKKANGFSMESSYSKKHEISIWKRLVLVRGPLGIVSVTEMAFLIMFIVLLVWSFSVYLQNGFAQITQKSAAEKGVKVWEMKLGSAGVRLGLIGKICLAFLFFPVARASSVLPLLGLTSERCIKYHIWLGHLAMTLFTAHGLCLIIKWALTGQLSKMLEWKKNGISNVAGEVALVVGLLMWIAAIPRIRRKAFELFFYTHYLYILFIVFFIFHVGMFHACTVLPGFYLFLVDRFLRFLQSRLRVRLVSARVLPCQTVELNFSKNHGLTYSPTSIMFINVPSISKLQWHPFTITSNSNLEPKMLSVVIKGAGTWSQKLYQMLSTPSAIDHLNVSVEGPYGPASTNYLRYDTIVMVSGGSGITPFISIIRELMHLTSTFKYKIPKVILICAFKKSSYLSMLDLILPISGTPYDISNMQLQIKAYITREEEHELKSQIHTQQIWFKPKATDASISAILGPNNWLWLCAIISSSFIIFLIIIFIITRYIIFPRDHNSHKMFSQPLSSLLNMLAICVSIAMAASAAVLWNNKHNHKEAKQIQELEGSSIDERDKELESLPYQSIVQATKVHYGVRPDLKRLLFEFKGSRVGVYVSGPKKMKQEVATICSSDLAENLYFESFSFNW 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01935 707 Pfam FAD-binding domain 330 429 IPR013112 GO:0016491
Cca07g01935 707 Gene3D - 570 706 IPR039261 -
Cca07g01935 707 SUPERFAMILY Riboflavin synthase domain-like 326 412 IPR017938 -
Cca07g01935 707 SFLD Ferric reductase subgroup (FRE) 22 707 - -
Cca07g01935 707 Gene3D - 419 544 IPR039261 -
Cca07g01935 707 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 326 431 IPR017927 GO:0016491
Cca07g01935 707 Pfam Ferric reductase like transmembrane component 178 297 IPR013130 -
Cca07g01935 707 PANTHER NADPH OXIDASE 18 706 - -
Cca07g01935 707 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 419 688 IPR039261 -
Cca07g01935 707 CDD NOX_Duox_like_FAD_NADP 333 512 - -
Cca07g01935 707 Pfam Ferric reductase NAD binding domain 435 691 IPR013121 GO:0016491
Cca07g01935 707 PANTHER FERRIC REDUCTION OXIDASE 2 18 706 - -
Cca07g01935 707 SFLD Ferric Reductase Domain 41 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01935 Cca-Chr7 46690906 46695478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01935 1 707 Miscellaneous Gene Families AT1G01580 54.321 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01935 K00521 - gmx:100814642 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01935 07 46690906 46695478 Cca01g02297 01 51432633 51439635 PCT