Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02297 ATGGGTCAAGAAACGGTGGCGAAAAGGGTTCAATTTGCAATAAGGCTATTTGTGCTGGTATTGTTCCTGGGTTGGATTCTGATTTGGATAATGATGCCCACAAATACTTACAGAAAAAGATGGCTGCCTCGATTCAGAGCAAAGACTAATAACTCAACCTATTTTGGTGCAAAAGGTGCTAATCTTCTGATGTACACTTTCCCAGTCTTATTGGTAGCTACTTTGGGATGTGTCTACCTCCACATAGCCAAAAAAGTAAATGATTCCAACAAGGAAAGCTGCAATGCAAAGAAACAACATAAGGTAATCATATGGAAGCGTCCAGTGCTCATAAAAGGCCCTCTTGGCATTGTTTCTGGCACAGAGCTAGCATTCTTCCTCATGTTTATTGCACTCCTTATTTGGAGCTATACAACTTCTATATACAACAACTTCGCAACAATTACCCCAAAGTTGGCAGCAAAAGATGGCGAGAAAGTATGGGAAGAGAAACTAGAGAGTGCAGCACTAAGGTTGGGTGTGGTTGGGAACATATGCTTGGCATTTCTGTTTTTTCCGGTGGCTCGTGGCTCATGTTTGTTGCCTCTGCTTGGCCTGACCTCGGAGAATAGCATAAAGTACCATATTTGGCTTGGACACATGGCCATGATTCTCTTCACTTCTCATGGCATTTGCTACATCATATATTGGGCAGTTACCGATCAAATTTCTCGGGTACTGGAATGGAACAAAAATGATATATCAAATGTGGCTGGAGAGATATCTTTGCTTTTCGGTTTGTTCCTATGGATTGCAACCATTCCCCGTATCAGGCGAAAATTCTTTGAGCTCTTCTTTTACACTCATCACTTCTACATCCTCTTCATAGTCTTCTTCATCTTTCATGTTGGCATTTCCTATGCTTTTATTATGCTCCCTGGTTTCTATCTCTTCTTGGTTGATCGTTACTTAAGGTTTCTACAATCAAGGCAACAAGTTCGCTTGGTTTCTGCTCGGGTTTTGCCATGTGAAGTTGTAGAACTCAACTTCTCCAAGGGCCATGGATTAACTTACAACTCCACAAGTGTCATGTTCATAAATGTACCGAGCATATCCAAGTTGCAGTGGCATCCATTTACTATTACTTCTAATAGTAATTTGGAGCGAGATAAGCTAAGTGTTGTTATTAAAAGTGAAGGAAGTTGGACCAGGAAGCTCTATCAGTTGATTTCAACTTCTTCCACAATAGATCACCTTGTTGTATCTGTTGAAGGCCCTTATGGGCCTGCCTTAACCAATTATCTAAGGCATGAGAGTCTTGTGATGGTGAGTGGAGGAAGTGGCATCACACCTTTTATCTCCATAATTCGAGAGCTAGTATATATGAAGACTACATTCAAGTGCAAAACCCCAAAAGTTGTTCTAATTTGTGCATTCAAGAATTCTTCATCTTTGTCAATGCTAGATTTGATCCTCCCAATATCTGGCAACCCATCTGGGATTTCTGATATGGAATTACAAATTGAGGCCTACATCACAAGAGACAAGGAGTTTAAAGAAGATGGCCCAATTCAACCTAAAACCATATGGTTCAAGCCAAATCTATCTAATGCACCAATACATGCTATATTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCAATAATCTCATCCTCTTTCATCATTTTCCTTATCTTAATAGGGATCATTACCCGTTACTACATTTTCCCTATTGATCATAACTCGAATCAAATATTCTCATTCCCTTTAAATGCATTCCTTAACATGCTAGTAATATGTGTTTCCATAGTAAGTGTTGCTAGTGCAACTTTTCTTTGGAACAAGAAACATAATGCTAAAGAAATAAATCAGATTCAAAACTTGGAAGGTTCAACACCAACAGTGTCACCCAACTCCATGGTGTACAACGCAGATAGAGAATTGGAAAGCCTTCCATACCAGTCCCTTATTCATGTTACCAATGTTCATTATGGTGTAAGACCTAACCTAAGAAGAATGCTATTTGAACACAAAGGGTCAAGTGTGGGAGTTCTTGCTTCAGGACCCAAAATAATGAGACAAGAAGTTGCATCCATTTGCTCGTCTGCTTTAGCCAAAAATCTACATTTTGAGTCCATTAGTTTTAGTTGGTGA 2133 0.3976 MGQETVAKRVQFAIRLFVLVLFLGWILIWIMMPTNTYRKRWLPRFRAKTNNSTYFGAKGANLLMYTFPVLLVATLGCVYLHIAKKVNDSNKESCNAKKQHKVIIWKRPVLIKGPLGIVSGTELAFFLMFIALLIWSYTTSIYNNFATITPKLAAKDGEKVWEEKLESAALRLGVVGNICLAFLFFPVARGSCLLPLLGLTSENSIKYHIWLGHMAMILFTSHGICYIIYWAVTDQISRVLEWNKNDISNVAGEISLLFGLFLWIATIPRIRRKFFELFFYTHHFYILFIVFFIFHVGISYAFIMLPGFYLFLVDRYLRFLQSRQQVRLVSARVLPCEVVELNFSKGHGLTYNSTSVMFINVPSISKLQWHPFTITSNSNLERDKLSVVIKSEGSWTRKLYQLISTSSTIDHLVVSVEGPYGPALTNYLRHESLVMVSGGSGITPFISIIRELVYMKTTFKCKTPKVVLICAFKNSSSLSMLDLILPISGNPSGISDMELQIEAYITRDKEFKEDGPIQPKTIWFKPNLSNAPIHAILGPNSWLWLGAIISSSFIIFLILIGIITRYYIFPIDHNSNQIFSFPLNAFLNMLVICVSIVSVASATFLWNKKHNAKEINQIQNLEGSTPTVSPNSMVYNADRELESLPYQSLIHVTNVHYGVRPNLRRMLFEHKGSSVGVLASGPKIMRQEVASICSSALAKNLHFESISFSW 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02297 710 CDD NOX_Duox_like_FAD_NADP 328 507 - -
Cca01g02297 710 Pfam Ferric reductase like transmembrane component 172 292 IPR013130 -
Cca01g02297 710 SFLD Ferric reductase subgroup (FRE) 14 710 - -
Cca01g02297 710 Pfam Ferric reductase NAD binding domain 430 694 IPR013121 GO:0016491
Cca01g02297 710 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 414 486 IPR039261 -
Cca01g02297 710 Gene3D - 414 534 IPR039261 -
Cca01g02297 710 SFLD Ferric Reductase Domain 32 710 - -
Cca01g02297 710 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 321 426 IPR017927 GO:0016491
Cca01g02297 710 PANTHER NADPH OXIDASE 11 709 - -
Cca01g02297 710 PANTHER FERRIC REDUCTION OXIDASE 2 11 709 - -
Cca01g02297 710 Pfam FAD-binding domain 325 422 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02297 Cca-Chr1 51432633 51439635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02297 4 710 Miscellaneous Gene Families AT1G01580 58.964 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02297 K00521 - gmx:100790114 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01935 07 46690906 46695478 Cca01g02297 01 51432633 51439635 PCT