Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01932 ATGGGCTTCAATTTGATCCTATGGTGTCATCCCAATCTGCTTCTCACTGTTTTGGTGCTCTTTTCCTGTTCCTTCGGCGTTTTCTCTGCAAATGGTGAAGTGGGCACTGGTAAAGGTGAAACCTTTACTGTTTCAAGCTTCAGATACCCTGAGACTAGGCTCAGGCCCTTTGATTTGCGCTATATCAGAGTTGACTTGCCGCCATGGTTTTCTGCACTGTCTATTGCATTGAACtcagatgtagaccttGATGTTTCAAGAACTGAAAGGGTTCCAATGAGCACATTGCCAATAATATGCTTTAGAGATGGAAGTCCTCCACTGCCGGATGCCTTAAACACATCTCTGAAAGATTCAGCCGTCTCTGGGATAAATGGTTTAGATGTGGAGCAGTGCTTTCCTATGCAGAAAAACATCACTATGAAACTGACAAACAATCAGATATCTCCGGGTGTTTGGTACATTGGTCTTTTCAATGGCATTGGACCTACAAGGACACAATCAAAGATGATTATACGGGGTCCATCGTACTTCTTCATTGCCAATATAAGTGTGGAAGCATGCACAGATTCAATGATGAGCGGGGATTTCTGCAACAGTACAGTTTATCCACTTTCATGCACAGCATCGCAGTCGGACTTCTCTAATTCTTTGGAGGCTAAAGTGAACATGTCAGTGTTTGAAAATTTGGTGACCTGCAAAAGTAATTTTGAAACTTTTTGTGTTCATGAAGGTGTACCAAACTTCTTCTCCCTGGATATAATGAATGTGGCAGAAGAAATCGTCATTACAGCAACAAATATCAGATTCAATGTTACTCCATCGAGTAACACTGATGGCAAAAATGATATTATCTTAATGTGTTTTGTCCGCCATGGTGCAATGCCATCAGTGACTCATTATGATCATTCCATTGATATAGCTAAAACCCCCCTGATTATTCATTCACCATTAATTGGTCGTTGGTACATTAGTATAGAACCAATCAATCTTACAAAGACTCAGGAGAACAATGTAAGAGTTTGCTATTCAGTGAAATCTCAAGTGCTTCAATGCCCACTTGGGAAAGCTGGACCGAATTGTACAATGGATAGCTACTTGCTTCAGACATTTGTAAGGAGAGGTTCAACCCCCTTTGAATCATATTATTTACCAGTTGGTGGAGGAGCATCTTATGATTCTGCCAATTTTCCTCTTGAGCCACTTTTAAAAAACTCATCATACATTGGAGAACCTGATAACATTTGGACTTACTTTCTTATGGACATTCCTCGTGGTGCAGCTGGAGGAAATATTCACGTACAACTATCCTCAGATATGAAGATCGGTTATGAAGTGTATGCTAGATTTGGTGGATTACCATCTCTTGATAGCTGGGACTATTATTATGCTAACAAGACAAGGAGAAGTGATACATCTATGTTTTTCACGTTATATGATTCAAGTGATGACAAAGTTAACTTTTATATTATGTATGCTAGAGAAGGAACTTGGGGTTTTGGTCTAAGACATCTTAGTGATCTTAATAGCAGCAGTGATTCCATGAAAGGGCCAACTATCATGTCCCTTTCACTTGAGCGATGCCCAAAACGATGTTCCTCTCACGGAGACTGTAAATTTGCTTTTGATGCTAGTGGATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGAGGCTTTGACTGCAGCATTGAAATTGTAACACATCAAGGGCATGTGCGACAATCAATTTTTCTCATTGTATCAAATGCTGCAGCCATACTTCCTGCCTATTGGGCCCTTCGGCAGAAGGCATTGGCAGAATGGGTTTTATACACATCCAGTGGAATTTCAAGTGGACTATATCATGCATGTGACGTAGGTACTTGGTGTGCATTGAACTATAATGTCTTACAGTTCATGGATTTCTGGCTCTCTTTCATGGCTGTGATTAGCACTTTTCTTTATCTAGCTACAATTGATGAAGTATTTAAGAGGGCAATTCACACAGCAGTTGCTATCCTTACTGCCCTAATGGCTGCAACTAAAGCAACCAGGGCTTCCAATGTTGTTCTTGTGATTGTGATTGGTGGTCTTGGTCTCCTTATTGGATGGTTGATAGAGATCTTAACAAAGTGTAGGTCCCTTTCCTTTCCAATTGGAGTCTCACTTAATTTCTCTCACTGTTTCCAAACTATAAAGCGATGGCTCTATAATCTTGTTGTGACACTTTTGAGACGTTACCATTGGGCTTTTGCCTTAGCTGGTTTTACTGCATTGGCCATGGCAGCAATAAGCTGGACACTTGAAACCAGTGAAACCTACTGGTTTTGGCATAGCATTTGGCATATTACAATATACACTTCTTCCTTCTTCTTCCTTTGTTCAAAAGCAAATATTGAGGATAGTGAGAATCAACTTCCGACAAGTGGAAACTATGAATTGACTCATCAAGATTCACTTCCAAGAAGTGGTTAG 2463 0.4015 MGFNLILWCHPNLLLTVLVLFSCSFGVFSANGEVGTGKGETFTVSSFRYPETRLRPFDLRYIRVDLPPWFSALSIALNSDVDLDVSRTERVPMSTLPIICFRDGSPPLPDALNTSLKDSAVSGINGLDVEQCFPMQKNITMKLTNNQISPGVWYIGLFNGIGPTRTQSKMIIRGPSYFFIANISVEACTDSMMSGDFCNSTVYPLSCTASQSDFSNSLEAKVNMSVFENLVTCKSNFETFCVHEGVPNFFSLDIMNVAEEIVITATNIRFNVTPSSNTDGKNDIILMCFVRHGAMPSVTHYDHSIDIAKTPLIIHSPLIGRWYISIEPINLTKTQENNVRVCYSVKSQVLQCPLGKAGPNCTMDSYLLQTFVRRGSTPFESYYLPVGGGASYDSANFPLEPLLKNSSYIGEPDNIWTYFLMDIPRGAAGGNIHVQLSSDMKIGYEVYARFGGLPSLDSWDYYYANKTRRSDTSMFFTLYDSSDDKVNFYIMYAREGTWGFGLRHLSDLNSSSDSMKGPTIMSLSLERCPKRCSSHGDCKFAFDASGLTSYSFCSCDRNHGGFDCSIEIVTHQGHVRQSIFLIVSNAAAILPAYWALRQKALAEWVLYTSSGISSGLYHACDVGTWCALNYNVLQFMDFWLSFMAVISTFLYLATIDEVFKRAIHTAVAILTALMAATKATRASNVVLVIVIGGLGLLIGWLIEILTKCRSLSFPIGVSLNFSHCFQTIKRWLYNLVVTLLRRYHWAFALAGFTALAMAAISWTLETSETYWFWHSIWHITIYTSSFFFLCSKANIEDSENQLPTSGNYELTHQDSLPRSG 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01932 820 ProSitePatterns EGF-like domain signature 1. 553 564 IPR000742 -
Cca07g01932 820 Pfam Protein of unknown function (DUF3522) 574 779 IPR021910 GO:0016021
Cca07g01932 820 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 13 819 - -
Cca07g01932 820 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 13 819 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01932 Cca-Chr7 46606585 46625743 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01932 - - gmx:100778959 1479.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01932 07 46606585 46625743 Cca01g02290 01 51277624 51285874 PCT