Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01918 ATGGCTATGGGTGGTTTGGTTTCCAACAGGAACTTCACTTCTTTCATTGGACCAGGAAGTGTATATCAATTGGGAAAGGATCTATCACCTCAAAGAAGGGGCAGTTCTTGTGTATTTGGTGTGCGTTATGGGATGTGTTTTCATCATGCTAAAGATCCTTTGAATGAGAAAGTGTCAAAACCAATACCAACATTTCATGATGAAGTGCAGCATTATTCTCCACTATCCCAGAAATCCATCCACTGCATGAACTTGAAACTTAAGGCCAGCAGAAGGTGTCAATGCTACCTCTCTTCAGATCCCTACAGCAGTAGCCTTATTCAACCAAGAGCAGTGTATGGACTAGGTTTAAGCAAACTTGGTAAGGTGAATACCGCTTGTGTTCATTACAAGTCCGAGGATTATGATATTGCAGAAACAAAGATGGATTCTCTGGCATCAACTGAAGGGACAGGTGAAGCCGTTCTCCTGGAAGGAAATGTTCCACAAGTATCTTCTTGGTGGCAGCAGTTTCCTAAGCGCTGGGTTATTGTATTGCTGTGTTTCGCAGCATTTCTGCTGTGCAACATGGACCGTGTGAATATGAGCATAGCAATACTTCCGATGTCACAAGAATTTAACTGGAACAGTGCAACAGTTGGCCTAATTCAGTCATCTTTTTTCTGGGGCTATCTACTTACTCAGATCCTTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGCTAGTGCTAGGTTTTGGAGTTGTCTGGTGGTCAATGGCAACAGTTTTAACACCTATTGCTGCAAGAGTTGGCCTCCCTTATTTGCTTATTATGCGTGCCTTTATGGGGATTGGTGAGGGTGTTGCCATGCCTGCTATGAATAATATGCTTTCCAAGTGGATTCCAGTTTCAGAGAGAAGCAGATCACTTGCCCTAGTATATAGTGGCATGTACCTTGGTTCTGTGGTTGGCTTGGCATTCTCACCAGTGCTAATCCAAAATTTTGGGTGGCCATCAGTGTTTTACTCTTTTGGATCCCTTGGAAGTATCTGGTTTGCCTTGTGGTTGAGAAAGGCATATAGCACACCAAAAGATGACCCTGATCTTGGGGTAGAGGAGAAAAGGCTCATATTGGAAGGCAATGCATCAAATGCACCTGTTTCTGACATTCCTTGGAAATTAATTTTATCAAAAGCACCTGTCTGGGCTCTAATAATCTCCCACTTCTGTCACAATTGGGGGACATTTATTCTTTTAACCTGGATGCCTACTTACTATAATCAGGTTCTGAAGTTCAACCTCACTGAATCAGGGCTCTTGTGTGTTCTTCCATGGTTAACCATGGCTGCTTTTGCAAATATTGGCGGGTGGATTGCTGACACACTAGTGAGAAAAGGCCTCTCCATAACAGTTGTACGAAAGATCATGCAATCAATCGGGTTCCTGGGACCTGCCTTTTTCCTTACTCAGCTGAGCCATGTCAAAACACCTGCCATGGCTGTACTGTGCATGGCATGTAGTCAGGGATCTGATGCATTCTCACAATCTGGTCTGTATTCCAATCACCAAGACATCGGACCACGCTATGCTGGTGTATTGCTTGGACTATCGAATACAGCAGGAGTGCTTGCTGGTGTCTTTGGTACAGCAGCAACTGGTTTCATACTCCAGCGAGGTTCTTGGAATGATGTTTTTAAGGTTGCTGTTGCATTGTACATAATTGGCACATTGGTCTGGAATATCTTTTCGACTGGGGAGAAAATTCTTGATTAA 1755 0.4376 MAMGGLVSNRNFTSFIGPGSVYQLGKDLSPQRRGSSCVFGVRYGMCFHHAKDPLNEKVSKPIPTFHDEVQHYSPLSQKSIHCMNLKLKASRRCQCYLSSDPYSSSLIQPRAVYGLGLSKLGKVNTACVHYKSEDYDIAETKMDSLASTEGTGEAVLLEGNVPQVSSWWQQFPKRWVIVLLCFAAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKLVLGFGVVWWSMATVLTPIAARVGLPYLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVVGLAFSPVLIQNFGWPSVFYSFGSLGSIWFALWLRKAYSTPKDDPDLGVEEKRLILEGNASNAPVSDIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAAFANIGGWIADTLVRKGLSITVVRKIMQSIGFLGPAFFLTQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGFILQRGSWNDVFKVAVALYIIGTLVWNIFSTGEKILD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01918 584 CDD MFS_SLC17A9_like 178 577 IPR044777 -
Cca07g01918 584 ProSiteProfiles Major facilitator superfamily (MFS) profile. 177 581 IPR020846 GO:0022857
Cca07g01918 584 PANTHER ANION TRANSPORTER 4 67 584 - -
Cca07g01918 584 Gene3D MFS general substrate transporter like domains 172 361 IPR036259 -
Cca07g01918 584 SUPERFAMILY MFS general substrate transporter 163 576 IPR036259 -
Cca07g01918 584 PANTHER SOLUTE CARRIER FAMILY 17 67 584 - -
Cca07g01918 584 Pfam Major Facilitator Superfamily 181 542 IPR011701 GO:0022857|GO:0055085
Cca07g01918 584 Gene3D MFS general substrate transporter like domains 389 581 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01918 Cca-Chr7 46325895 46332922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01918 1 584 Organic Solute Cotransporters AT4G00370 72.603 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01918 K08193 - gmx:100784401 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01918 07 46325895 46332922 Cca07g01918 07 46325895 46332922 ECH
Cca07g01918 07 46325895 46332922 Cca01g02278 01 51142031 51149024 PCT