Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01908 ATGTCTAACCCCAAATCTTATGCAGACTTTCCCATTTTAGACCTTTCTCAGCCATTGCAGGCATCTTCTCTATCCTCTCTCCATAAGCCAAGCAAAGATTGGGGGTTCTTCCACATAATCAACCATGGAATCTCCAAAGATCTTTGCAGCCAGATCAAGTCACTATCCAAACACCTCTTCAGTCTCCCTTATGATACTAAACTTAGACTTGGTCCTTTCTCATCTTTGAAATCTTACACCCCTCATTTCATTGCCTCTCCATTCTTTGAGAGCCTTCGAGTTAATGGACCCAACTTTTATGTTTCTGCTAATAGTTCTACTGAAATCCTCTTTGAAAAAAAGGACTCCAAATTCAGTTTGATAATCCAAGAATATTGCAGTAAGATGGAAGAATTGTCTAAGAGAATTCTAAAGATTGTGTTGATGGGGTTAGGGGATGGCATTGAGAAGAAGTTTTATGATTCTGAGTTCAACAAGTGCCAAGGTTACTTGAGGATAAACAATTACTCAGCCCCAGAAATTACGGAACATGATCAAGTTGAGGGACTTGGCATGCACACTGATATGAGTTGTATTACTATCTTACATCAAGATGAAATTGGAGGGCTTCAAGTGAGGTCAAATGAGGGAGAGTGGATAGATATATGTCCTTCTGAGGGAACCCTAGTGGTGAACATAGGGGATATGTTGCAAGCTTGGAGCAATGACAAACTAAGATCCTCAGAACATAGAGTGGTTTTGAAGCATCATCATGTGAACCGGTTTTCTCTAGCATTCTTTTGGTGCTTTGAGGATGACAAGGTGGTTTTGGCACCAGATGAAGTTGTTGGAGAAGGAAACAAGAGGAAGTACAAGCCATTTGTGTGTTTGGACTATTTGAAATTTAGAGAGAACAATGAAAGAGGGAGATTTGATAAGGTGGGTTTCACAGTCACTGATTTTGCTGGGATCATGGCTCAGCTGTAA 966 0.4037 MSNPKSYADFPILDLSQPLQASSLSSLHKPSKDWGFFHIINHGISKDLCSQIKSLSKHLFSLPYDTKLRLGPFSSLKSYTPHFIASPFFESLRVNGPNFYVSANSSTEILFEKKDSKFSLIIQEYCSKMEELSKRILKIVLMGLGDGIEKKFYDSEFNKCQGYLRINNYSAPEITEHDQVEGLGMHTDMSCITILHQDEIGGLQVRSNEGEWIDICPSEGTLVVNIGDMLQAWSNDKLRSSEHRVVLKHHHVNRFSLAFFWCFEDDKVVLAPDEVVGEGNKRKYKPFVCLDYLKFRENNERGRFDKVGFTVTDFAGIMAQL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01908 321 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 72 IPR026992 -
Cca07g01908 321 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 264 IPR005123 -
Cca07g01908 321 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 314 - -
Cca07g01908 321 Pfam 2OG-Fe(II) oxygenase superfamily 165 260 IPR044861 -
Cca07g01908 321 SUPERFAMILY Clavaminate synthase-like 5 299 - -
Cca07g01908 321 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 314 - -
Cca07g01908 321 Gene3D - 1 295 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01908 Cca-Chr7 46164144 46165736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01908 9 292 Glycosyltransferase AT5G59530 29.352 3.61e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01908 - - gmx:100812108 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01908 07 46164144 46165736 Cca07g01908 07 46164144 46165736 ECH
Cca07g01908 07 46164144 46165736 Cca01g02266 01 50905482 50907113 PCT