Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02266 ATGTCTAAGCCTGAATATGTTGAGCTTCCTATTTTAGACATTTCTCAGCCATTACAGCCATCTTCTCTAGCCTCTCTCTCTAAAGCTTGCAAAGATTGGGGATTTTTCCACATAATCAATCATGGAATCTCCAAAGATCTTTGCAGCCAGATGCATTATTTATCCAAAATCCTCTTCAGCCTCCCTTCTGAGGCTAAACTTAAACTTGGTCCTTTCTCCTCTATAAAGTCCTACACCCCTCACTTCATTGCTTCTCCATTCTTTGAGAGCCTCAGAATTAATGGACCAGACTTCTATGTTTCAGCCAAGAGTTCTGAAGACATTCTCTTTGACAAACAGAATTACAAATTCAGTGAGACACTCCAGGAATATTGTAGTAAGATGGCATACTTATCTGAGAAAATTCTAAAGCTTGTGTTGATGAGCTTAGAGGATGGCTTTGAGAAGCTGTTTTATGATTCTGAATTTAGCAAGTGTCATGGCTACTTGAGGATAAACAACTATTCTGCTCCAGAAAGTTTGGAGGATCAAGTTGAGGGGCTTGGAATGCACACTGATATGAGTTGTATCACAATCTTGTATCAAGATGAAATAGGAGGGCTTCAAGTGAGATCACATGAAGGAAAGTGGATAGACATAAGCCCTTCTGAGGGGACCCTAGTGGTGAACATAGGGGACATGATGCAAGCTTGGAGCAATGATAAGTTAAGGTCTTCTGAGCATAGAGTTGTTCTGAAGCAGCCTGTGAATAGATTTTCCTTGGCTTTCTTTTGGTGCTTTGAGGATGAGAAGGTGGTGCTGGCACCAAATGAAGTTGTTGGAGAAGGAAACAAGAGGACGTACAATCCATTTGTGTGCTCAAATTACCTGAAATTCAGAGAGAACAATCAGAAAGGAAGGTTTGAAAAGGTGGGGTACACAGTTAAGGATTTTGCAGGGATCAAGTCTCAACTGTAA 957 0.4075 MSKPEYVELPILDISQPLQPSSLASLSKACKDWGFFHIINHGISKDLCSQMHYLSKILFSLPSEAKLKLGPFSSIKSYTPHFIASPFFESLRINGPDFYVSAKSSEDILFDKQNYKFSETLQEYCSKMAYLSEKILKLVLMSLEDGFEKLFYDSEFSKCHGYLRINNYSAPESLEDQVEGLGMHTDMSCITILYQDEIGGLQVRSHEGKWIDISPSEGTLVVNIGDMMQAWSNDKLRSSEHRVVLKQPVNRFSLAFFWCFEDEKVVLAPNEVVGEGNKRTYNPFVCSNYLKFRENNQKGRFEKVGYTVKDFAGIKSQL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02266 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 311 - -
Cca01g02266 318 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 261 IPR005123 -
Cca01g02266 318 Gene3D - 1 292 IPR027443 -
Cca01g02266 318 Pfam 2OG-Fe(II) oxygenase superfamily 164 257 IPR044861 -
Cca01g02266 318 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 5 311 - -
Cca01g02266 318 SUPERFAMILY Clavaminate synthase-like 4 295 - -
Cca01g02266 318 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 77 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02266 Cca-Chr1 50905482 50907113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02266 7 289 Glycosyltransferase AT5G59530 30.233 4.02e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02266 - - gmx:100782766 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01908 07 46164144 46165736 Cca01g02266 01 50905482 50907113 PCT