Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01903 ATGGCGAAGGAAGAAGTGTTTGAGTTCCTCGGTAACGTTCCTCTGCTGCAAAGACTTCCTGGCTCGTCTGTGCGGAAGATATCTGAACTTGTGATTCTCAAACACTATGAGCGGGGGGAGCATGTTGTTCGTGAGGGAGAACGTGGGGATGGTCTTTACTTCATTTGGGACGGAGAGGCTGAGGTTGTTGACTCTGTTAGCACCGCTGAAGAAAATCCTCCCGAGTTTCAGTTGAAAAGATATGACTATTTTGGTTTTGGTTTATCAAATACAGTCCACCACGCTGATGTCGTAGCTTTGACAAAGTTATCATGCTTGGTGCTGCCCCATGAGCACTCAGCACTGCTGCAGCCAAAGTCTATCTGGAGTGCAGAAAAGTCTCTTGATAGCTCATCGGTGGAACATATATTGCATTTGGAACCTATAGAGGTAGATATCTTCCGAGGAATCACCCCTGAAGATGCTCCGAAGTTTGGGAAGGTATTTGGGGGTCAAATAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGCCTCAAATTTGTTCACAGCTTGCATGCCTATTTTCTTCTTGTGGGGGATTTTAACATACCAATTATATATCAAGTTAATCGTCTCCGTGATGGGAAGAGTTTTGCTACAAGGAAAGTGGATGCAATTCAAAAGGGAAATGTCATATTCACTTTGTTGGCTTCGTTTCATAAGGAAGAATTAGGGTTTGTACACCAGGAAGTCTCTATCCCATCAGTTCCTGCTCCAGATAAGCTTTTATCGATGGAAGAGCTACGGGAGCTACGCCTTATTGACCCTCGTCTTCCAAGAACTTACCGGAACAAGGTTGCTACAACTGAATTCATTCCCTGGCCCATAGAGATACGGTTCTGTGAACCTAAAACTTCGACAAATCAGACCAAGTCTCCTCCTAGTTTGAGATACTGGTTTAGAGCAAAGGGGAAACTTTCAGATGATCAGGCCCTGCATAGGTGTGTGGTAGCATATGCTTCAGATCTAATCTTTCTTCAAGTGAGTGTAAACCCCCACCGTAAGAAAGGCACGAAGCAACGTGCTGTGAGTCTCGACCACTCCATGTGGTTTCACAGACCTTTAAGAGCTGATGACTGGGTGCTATTTGATATATTTAGTCCTAGTGCCTCTAATGCACGTGGCTCTGTCTCTGGTGAAATGTTCAATCAGAAAGGAGAGCTTCTTGTATCGGTGGTTCAAGAAGGTCTGATGAGAAAAGTTACCCTGAAATCTAATATGTGA 1272 0.4458 MAKEEVFEFLGNVPLLQRLPGSSVRKISELVILKHYERGEHVVREGERGDGLYFIWDGEAEVVDSVSTAEENPPEFQLKRYDYFGFGLSNTVHHADVVALTKLSCLVLPHEHSALLQPKSIWSAEKSLDSSSVEHILHLEPIEVDIFRGITPEDAPKFGKVFGGQIVGQALAAASKSVDCLKFVHSLHAYFLLVGDFNIPIIYQVNRLRDGKSFATRKVDAIQKGNVIFTLLASFHKEELGFVHQEVSIPSVPAPDKLLSMEELRELRLIDPRLPRTYRNKVATTEFIPWPIEIRFCEPKTSTNQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSVNPHRKKGTKQRAVSLDHSMWFHRPLRADDWVLFDIFSPSASNARGSVSGEMFNQKGELLVSVVQEGLMRKVTLKSNM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01903 423 PANTHER ACYL-COA THIOESTERASE 51 418 IPR003703 GO:0006637|GO:0047617
Cca07g01903 423 CDD Thioesterase_II_repeat1 312 414 - -
Cca07g01903 423 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Cca07g01903 423 Gene3D Jelly Rolls 2 122 IPR014710 -
Cca07g01903 423 PANTHER ACYL-COA THIOESTERASE 51 418 - -
Cca07g01903 423 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 239 IPR029069 -
Cca07g01903 423 CDD Thioesterase_II_repeat2 145 237 - -
Cca07g01903 423 TIGRFAM tesB: acyl-CoA thioesterase II 137 415 IPR003703 GO:0006637|GO:0047617
Cca07g01903 423 SUPERFAMILY cAMP-binding domain-like 4 112 IPR018490 -
Cca07g01903 423 CDD CAP_ED 15 112 IPR000595 -
Cca07g01903 423 Pfam Thioesterase-like superfamily 160 414 - -
Cca07g01903 423 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 247 416 IPR029069 -
Cca07g01903 423 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Cca07g01903 423 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Cca07g01903 423 SMART cnmp_10 15 132 IPR000595 -
Cca07g01903 423 Gene3D - 127 417 IPR042171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01903 Cca-Chr7 46046863 46058145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01903 1 416 Acyl Lipid Metabolism Gene Families AT1G01710 67.146 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01903 K01068 - gmx:100805018 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01903 07 46046863 46058145 Cca07g01903 07 46046863 46058145 ECH
Cca07g01903 07 46046863 46058145 Cca01g02264 01 50874836 50885027 PCT