Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02264 ATGAAAATGGAGAAGGAGGAAGcgttcgagtttctcggttgcgttCCGCTTCTGCAGAGGCTTCCAAGCTCGGCTCTGAGGAAAATATCTCAGTATGTGGTTGTCAAACACTGTGAGCCAGGAGAGTATGTTGTTCGTGAGGGTGAACCTGGGGATGGCGTGTACTTCATATTGGATGGAGAGGCCGAGGTTGTTGGATTTGTTAGTGCCAATGATGAAGATCGTCCAGAGTTCCAATTGAAAAGATACGACTACTTTGGTTATGGTTTGTCAGACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAGCTGACATGCTTAGTGCTGCCCAACGAGCACTCAACACTGCTGCAGCCTAAGTCTATCTGGAGTGCAGAAAATTCTCTTGAAACATGCTCATCTGTGGAGAATATATTGCATTTGGAATCCATAGAGGTAGATATCTTCCAAGGAATTACCCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGGCAGATGATTGGACAGGCACTGGCTGCGGCATCAAAATCTGTTGATTCTCTTAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTTGCAGGGGATTTACACATGCCAATTATATATCAAGTTCACCGTTTCCGTGATGGAAAGAGCTTTGCTACAAGGAAAGTGGATGGAATTCAAAAGGGAAAAGTCATATTCACTTTGCTGGCTTCATTTCAAAAAGAAGAATCAGGGATGGACCACCAGGAAGTAGCTTTGCCATCTGTTCCGGCTCCAGATAAGCTTCTGCCGATGGAAGAGATGCGGGAGAGACGTCTTACTGACCCTCGTTTACCAATAACCTACCGGAACAAAGTAGCTACAACTCAATTCATCCCTTGGCCCATAGAGATACGGTTCTGTGAATATGAAATTTCAACAAATCAGACAAAATCTCCTCCCAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGTGTGGTGGCATATGCCTCGGATCTTGTATTTCTTCAAGTAAGTTTGAATCCGCACCGTGAGAAGGGTTTCAGGACACGTTCTGTTAGTCTCGACCACTCTATGTGGTTTCACCGATCCTTGAGAGCAGATGACTGGGTGCTATTTGTGATCTTTACTCCAAGCGCCTATAATGCACGTGCCTTTGTCACCGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGGCTAGCTAGGAAAATTAGTCCACCAAATTCAACCATTAGATCCAAGTTGTGA 1296 0.436 MKMEKEEAFEFLGCVPLLQRLPSSALRKISQYVVVKHCEPGEYVVREGEPGDGVYFILDGEAEVVGFVSANDEDRPEFQLKRYDYFGYGLSDTVHQADVVALSKLTCLVLPNEHSTLLQPKSIWSAENSLETCSSVENILHLESIEVDIFQGITLPDAPRFGKVFGGQMIGQALAAASKSVDSLKVVHSLHAYFILAGDLHMPIIYQVHRFRDGKSFATRKVDGIQKGKVIFTLLASFQKEESGMDHQEVALPSVPAPDKLLPMEEMRERRLTDPRLPITYRNKVATTQFIPWPIEIRFCEYEISTNQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLVFLQVSLNPHREKGFRTRSVSLDHSMWFHRSLRADDWVLFVIFTPSAYNARAFVTGQMFNQKGELLVSLVQEGLARKISPPNSTIRSKL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02264 431 ProSiteProfiles cAMP/cGMP binding motif profile. 17 87 IPR000595 -
Cca01g02264 431 Pfam Cyclic nucleotide-binding domain 36 113 IPR000595 -
Cca01g02264 431 CDD Thioesterase_II_repeat1 315 416 - -
Cca01g02264 431 CDD CAP_ED 17 114 IPR000595 -
Cca01g02264 431 Gene3D Jelly Rolls 1 124 IPR014710 -
Cca01g02264 431 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 44 60 IPR018488 -
Cca01g02264 431 CDD Thioesterase_II_repeat2 148 240 - -
Cca01g02264 431 TIGRFAM tesB: acyl-CoA thioesterase II 140 418 IPR003703 GO:0006637|GO:0047617
Cca01g02264 431 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 250 419 IPR029069 -
Cca01g02264 431 SUPERFAMILY cAMP-binding domain-like 7 114 IPR018490 -
Cca01g02264 431 Gene3D - 131 420 IPR042171 -
Cca01g02264 431 PANTHER ACYL-COA THIOESTERASE 53 431 IPR003703 GO:0006637|GO:0047617
Cca01g02264 431 SMART cnmp_10 17 134 IPR000595 -
Cca01g02264 431 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 132 244 IPR029069 -
Cca01g02264 431 Pfam Thioesterase-like superfamily 163 416 - -
Cca01g02264 431 PANTHER ACYL-COA THIOESTERASE 53 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02264 Cca-Chr1 50874836 50885027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02264 3 431 Acyl Lipid Metabolism Gene Families AT1G01710 65.501 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02264 K01068 - gmx:100803260 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02264 01 50874836 50885027 Cca01g02264 01 50874836 50885027 ECH
Cca07g01903 07 46046863 46058145 Cca01g02264 01 50874836 50885027 PCT