Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01839 ATGATAGAACCGCTCCATTCTGATAACGAGCTTACCTTGGGTTTATATAGGTCCATCATACATGTTTCACTCTCACAACACGACGGACCGCTATTAGAATTTTCTTCCGAGAAAATTCAAAAAGCTTGTGCTTGTCATGCATGCCTCTGGTCTTCTGATTCTGAAGCCATAAGAAAGAGAAAAGAAGATTTGTCAATCATCAGAGTTGTATATCTCATAAGAAATTCAGGACAGGCTCAGGTTCTTGTTCAAGTGGTGTTAAATCAGAGCCTCAGGTTCCTCCGAAGAAGCCTCGGGTTGTACTTGCTGCTTGTGGATGTACTGCTGCTAGCAACGTTTCCCAATGATGCAAATGCTTATCACGATGAACATGAGTGGTATATTTGGAGAGGAATGGACGTTGAGCTTCTTGAATGGGCTGATATATTGGTCATTGCTCCGTTGTCGGCGAATACCCTTGCCAAGATTTCTGGGGGGCAATGTGACGATCTACTGTCAAGTATTGCACGAGGATGGGACTATAGTAAGCCATTTTTTGTTGCACCCTCGATGGACCCTTCTACGTGGAGAAATCCTTTCACACAACGCCATTGCGTGAGAATCAAAAACCTTGGCATTTCTGTTATTCCACCTGCTTCAGAAAAACTGGAATTTTTTGCGTCTTCAGATGAAGAAGGGGAAGATAAGACTGGCGCAATGCCTGAACCTTCTGAAATTTCTTACACCGTGAGGATCTCTAATCAAATTTATTGGAGTTGA 759 0.4295 MIEPLHSDNELTLGLYRSIIHVSLSQHDGPLLEFSSEKIQKACACHACLWSSDSEAIRKRKEDLSIIRVVYLIRNSGQAQVLVQVVLNQSLRFLRRSLGLYLLLVDVLLLATFPNDANAYHDEHEWYIWRGMDVELLEWADILVIAPLSANTLAKISGGQCDDLLSSIARGWDYSKPFFVAPSMDPSTWRNPFTQRHCVRIKNLGISVIPPASEKLEFFASSDEEGEDKTGAMPEPSEISYTVRISNQIYWS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01839 252 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 113 245 - -
Cca07g01839 252 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 119 243 IPR036551 GO:0003824
Cca07g01839 252 Gene3D - 64 249 IPR036551 GO:0003824
Cca07g01839 252 Pfam Flavoprotein 132 242 IPR003382 GO:0003824
Cca07g01839 252 PANTHER BNAA01G27100D PROTEIN 113 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01839 Cca-Chr7 45031757 45039235 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01839 K01598 - gmx:100812130 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01839 07 45031757 45039235 Cca01g02139 01 49063372 49066002 PCT