Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01838 ATGGATGCCTCGGCCAGTTCATCAAGTGGAAAGGAGAAAGCTGTGGTTTCTTTTCTTAGGAAGCCTCGGATTCTACTTGCTGCTTGTGGAAGTATTTCTGCGGTAAAGTTTGGAGATCTTTGTAGTCTTTTTGCAGAATGGGCAGAAGTAAATGCAGTTGTCACTAAATCATACTTGCGTTTTATTGATGGACAAACATTTCCCAAAAATACACAAGTATTCAGTGATAAACATGAAATGTTCCATTGGGGAAAGCTAGGTGATTCTGTACTTCACATTGAGCTTAATAAATGGGCTGATATCATGGTCATTGCTCCATTGTCAGCAAATACTCTCGCCAAGATAGCGGGAGGGTTGTGTGACAATCTACTGACATGCATAGTGCGAGCATGGGACTACAGAAAGCCATTTTTTGTTGCACCATCTATGAACAGTTTTATGTGGGACAACACTTTCACAGAACAGCATTGCATTACCCTTGAAGATCTTGGCGCCATTCTCATCCGACCACAAAAACCAAATATAGATGGTGAGGAAGCAGAATATGAGCATAGCTTAATGGAAGAACCTTCCAACATTTGCTCAAATGACCATTTGTCTTGGCTCCTCTTTGATCTTTTATCAGTTGAAGAATCTAGTGTGATGATCTCATAG 654 0.4067 MDASASSSSGKEKAVVSFLRKPRILLAACGSISAVKFGDLCSLFAEWAEVNAVVTKSYLRFIDGQTFPKNTQVFSDKHEMFHWGKLGDSVLHIELNKWADIMVIAPLSANTLAKIAGGLCDNLLTCIVRAWDYRKPFFVAPSMNSFMWDNTFTEQHCITLEDLGAILIRPQKPNIDGEEAEYEHSLMEEPSNICSNDHLSWLLFDLLSVEESSVMIS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01838 217 Pfam Flavoprotein 23 193 IPR003382 GO:0003824
Cca07g01838 217 Gene3D - 21 199 IPR036551 GO:0003824
Cca07g01838 217 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 21 175 IPR036551 GO:0003824
Cca07g01838 217 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 19 201 - -
Cca07g01838 217 PANTHER BNAA01G27100D PROTEIN 19 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01838 Cca-Chr7 45023293 45024239 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01838 K01598 - gmx:100782568 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02139 01 49063372 49066002 Cca07g01838 07 45023293 45024239 PCT