Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01823 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAAGCAGGTGCTCGTTCCCGCGCTCGAGAAAATCATCAAGAACGCGTCGTGGCGAAAACACGCGAAGCTCGCGCATGAGTGCAAGTCCGCCTCGGTCCCCGGCCCGATCCACGACGGCGGCCCCGTGGAGTACACGCTCGCCGAGTCGGAGTCGATCCTCCGCCCGCTCATCGCCGCCGCAGCCTCCGGCGTCGTGAAGATCGCGGATCCCGCCGTGGACGCCGTGCAGCGACTCATCGCGCACGGCTTCCTCCGCGGCGAGGCGGACTCCGGCGGCGGCGCGCCCGAGGCGAAGCTCGCGAGCCTGATCGAGGCGGTGTGCAAGTGCCACGACTTCGGCGACGACGCCGTCGAATTGCTCGTGCTGAAGACGCTCTTATCCGCGGTGACCTCGATTTCGCTGCGAATTCACGGTGATTGCTTGCTCTTGATTGTGAGAACTTGTTATGATATATACCTAGGGAGTAAAAATGTGGTGAATCAGACGACGGCGAAAGCGTCGTTGATTCAGATGTTAGTGATTGTGTTTAGGAGGATGGAGGCGGATTCGTCCACGGTTCCGGTTCAGCCTATTGTTGTGGCTGAATTGATGGAGCCTTTGGAGAAATCTGATGTGGATAATTCCATGACGCAGTCTGTGCAGGGTTTTATCACCAGGATTGTGCAGGACATTGATGGAGTTTTGAATCCGGTGTCGCCATCGTCGGCATTGAGCGGCCACGACGGCGCATTTGAGACCACCACATCGACGGTGGAGGCCGCGAATCCGGCGGATTTGTTGGATTCCACTGACAAGGACATGTTGGATGCCAAGTATTGGGAGATCAGTATGTATAAGACAGCGTTGGAGGGTAGGAAAGGGGAGCTGGTGGATGGGGAGCTGGTTGAGAGGGACGATGATTTGGAGATTCAGATCGGGAATAAGCTCAGGAGAGATGCTTTTTTGGTGTTCAGAGCTCTTTGTAAGTTGTCCATGAAGACGCCACCAAAGGAGGCGTCCGCTGACCCGCAGTTGATGAAGGGGAAGATTGTGGCGTTGGAGTTGTTGAAGATCTTGCTGGAGAATGCTGGAGCTGTCTTCAGGACTAGTGATAGCAGGTTTTTGGGTGCCATCAAGCAGTACTTATGTTTATCGTTGTTGAAGAACAGTGCCTCAACTCTTCTCATCGTTTTTCAGCTATCTTGCTCCATCTTCATTAGTCTGGTATCAAGATTTAGAGCTGGATTGAAAGCGGAAATTGGAGTATTTTTCCCCATGATTGTTCTCAGGGTTCTAGAAAATGTTGCTCAACCTAATTTTCAGCAAAAGATGATAGTGCTTCGTTTTCTAGAGAAGCTTTGTGATGATTCACAGATATTGGTGGACATTTTTATCAATTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCCCAAGGTGTCTCTCCGGGTGCAAATACCACAGTTTTGCCACCTCAAGAGGAAACACTAAAACTTGAAGCCATGAAGTGTTTGGTTGCTGTTTTAAAATCAATGGGAGACTGGATGAACAAACAATTACGTATTCCAGACCCTCATTCAGGCAAGAAAGTTGAAGCAGTTGATAATGGCCATGAAGCTGGAGGTCTTCCCATGGCAAATGGAAATGGAGAAGAACCAGTTGAAGGATCAGACACTCATTCTGAAATCTCCAATGAAGCATCTGAGGTTTCAACTATTGAGCAACGCCGGGCTTATAAACTGAAACTTCAGGAAGGTATATCACTTTTTAACAGAAAGCCAAAGAAAGGAATTGAATTCCTCATCAATGCCAACAAAGTGGGTAATTCACCTGAGGAAATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGGACAAGACTTTGATTGGTGATTATCTTGGAGAAAGGGAAGAATTATCCTTGAAAGTAATGCATGCGTATGTGGATTCTTTTGACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGCCTTTCTTCAAGGCTTTAGACTGCCTGGTGAGGCACAGAAAATTGATCGAATCATGGAGAAGTTTGCAGAACGATATTGCAAATGTAATCCAAAAGTCTTTTCTAGTGCTGATACAGCATATGTTCTTGCATATTCTGTGATACTGCTTAATACTGATGCTCACAATCCTATGGTGAAAAACAAGATGTCGGCTGAAGATTTCATAAAAAATAATCGTGGCATAGATGATGGAAAAGATGTACCAGAGGAATACTTAAGGTCTTTGTATGAACGAATATCTAGAAATGAGATCAAAATGAAAGAAGTTGATCTAGAAACCCAGCAAAAGCAAGCTGTGAACTCTAATAGAATTTTAGGCTTGGATAGTATATTAAATATTGTGATCCCAAAGCGTGGGGAGGACATTAATATGGGGACCAGCGATGATCTAATCCGACATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACCGAGTCAGTGTATTATGCAGCAACTGATGTCGTTATCCTCAGATTCATGATTGAGGTGTGCTGGGCACCAATGTTGGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAAGTTATAATAGCACTGTGTCTTGAAGGCTTCCGTTATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCACAGAGATGCTTTTGTTACTTCATTAGCAAAGTTTACTTCTCTGCATTCTCCTGCTGATATTAAGCAGAAAAACATAGATGCAATCAAGGTGATTGTTACTATTGCTGATGAGGATGGGAATTACTTGCAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCAGATTTGAACATCTACATCTTCTAGGAGAGGGGGCCCCACCAGATGCCACATTCTTTGCTTTTCCTCAAAATGATTCTGATAAATCAAAACAAGCAAAATCAACTATTCTTCCCGTTCTGAAGAAGAAGGGACCTGGGAGGATGCAATATGCAGCTGCCACAGTGATGCGGGGTTCATATGATAGCACTGGAATCGGCAGTAATACTTCTGGAGCTGTCACATCAGAGCAGGTGAACAATCTTGTTTCTAATTTGAACATGTTGGAACAAGTTGGAAGCTCGGAAATGAATCGCATATTCACTCGGAGTCAGAAGCTGAACAGTGAGGGCATAATAGATTTTGTCAAGGCTTTATGCAAAGTCTCCATGGAGGAACTGAGATCTCCATCTGATCCACGAGTGTTCAGCCTTACAAAGATAGTCGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATATGGCATGTTCTCTCAGATTTCTTTGTAACCATTGGTTGTTCCGGAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGAGGGAAGAATTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGGAAGAGTAGTGCTGTTGAAATTAGAGAGCTTATCATTAGATGTGTCTCTCAAATGGTTTTATCTCGTGTCAACAATGTAAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCATATGATGACCACAAAAACATTGTACTTTTGGCTTTTGAAATTATGGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACCACCTTTACAGACTGTGTGAATTGTCTAATTGCATTCACGAATAGTAGATTTAACAAAGAGATTAGCCTAAATGCCATTGCTTTCCTTCGATTCTGTGCAACAAAACTAGCAGAAGGAGACCTTGGATCCTCATCAAGAAATAATGACAAGGAAACTTATGGAAAGATATCAACTCCTTCACCTCGAACAGGAAAAGAGGGGAAACAAGATAATGGAGAGGTGACAGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCTGGTTTGTCTGAGCTTAGCTTTGATCCAAGGTCTGAGATAAGGCAAAGCGCCTTGAAAGTCCTGTTTGAAACCTTACGCAACCACGGGCACCACTTTTCACTACCTTTATGGGAAAGAGTATTTGAATCAGTCCTATTTCCAATATTTGATTATGTTCGTCATGCTATTGATCCTTCAGGGAGTAGCTCAGAGGTCAATGAAGTAGAGACTGATGGTCAACTTGATCAAGATGCATGGCTTTATGAGACATGCACATTAGCCCTCCAATTGGTGGTAGATCTTTTTGTCAACTTTTATAACACCGTCAATCCACTTTTAAGAAAGGTGTTGATGCTCCTGGTAAACTTTATAAAGCGTCCCCATCAAAGTCTAGCTGGCATTGGTATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCTGATGAGAAGTGGTTAGAAGTGGTTTTGTCACTAAAAGAAGCAGCTAATGCAACACTCCCTAACTTTTCATTCCTTGACAGTGAAGACTCTGTGACCAGAAATCATGAACATGCTTCAATGACTGAACATGACAGGGATCCTGCTGAGTCTGGCTCACATGAAAATTTAGAAATCCTGAGGACTCAACAACTTTATGCTTATTTATCTGATGCAAAGTGCCGAGCTGCTGTTCAGCTTTTATTGATCCAGGCGGTTCTGGAGATCTATAACATGTACCGTTCTCAACTTACAGCAAAAACCATACTACTATTGTTTGAGGCTTTGCATGATGTGGCATTACATGCACACAAGATTAACAGCAATATCATTTTACGTTCAAAGTTACTCGAGTTTGGCTCTGTGACCCAAATGCAAGACCCTCCACTGCTACGCCTGGAGAATGAGTCCTACCAAATATGCCTCACATTTTTACAGAACCTTGTTGTGGACAAGCCTCCTAGTTACGATGAGGTTGAGGTCGAGACACGTCTTGTTCAGCTCTGTCAGGAGGTCTTGGAGTTTTATGTTGAAGTTGCAGGTTCTGGAAGAATATCTGAATCTTCTCAAGGTAGACAGCAACATTGGTTAATTCCTCTAGGCACTGGGAAGCGAAGAGAATTGGCTGCACGTGCGCCAATTGTTGTGGCTACACTTCAGGCTATTACTAATTTGGGAGATATATCTTTTGAGAAGAATCTGGCTCATTTTTTCCCTCTCCTCTCAAACTTGATAAGTTGCGAACATGGGTCAATTGAAGTTCAGGTAGCTCTCAGCGACATGCTTAGTTTATCAGTTGGTCCTCTTTTGCTACGATCATGTTGA 5283 0.4369 MASSEADSRLKQVLVPALEKIIKNASWRKHAKLAHECKSASVPGPIHDGGPVEYTLAESESILRPLIAAAASGVVKIADPAVDAVQRLIAHGFLRGEADSGGGAPEAKLASLIEAVCKCHDFGDDAVELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMEPLEKSDVDNSMTQSVQGFITRIVQDIDGVLNPVSPSSALSGHDGAFETTTSTVEAANPADLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGELVERDDDLEIQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSDSRFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCDDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVSPGANTTVLPPQEETLKLEAMKCLVAVLKSMGDWMNKQLRIPDPHSGKKVEAVDNGHEAGGLPMANGNGEEPVEGSDTHSEISNEASEVSTIEQRRAYKLKLQEGISLFNRKPKKGIEFLINANKVGNSPEEIAAFLKDASGLDKTLIGDYLGEREELSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSAEDFIKNNRGIDDGKDVPEEYLRSLYERISRNEIKMKEVDLETQQKQAVNSNRILGLDSILNIVIPKRGEDINMGTSDDLIRHMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVIIALCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKVIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSDKSKQAKSTILPVLKKKGPGRMQYAAATVMRGSYDSTGIGSNTSGAVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEGIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIMEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAEGDLGSSSRNNDKETYGKISTPSPRTGKEGKQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRSEIRQSALKVLFETLRNHGHHFSLPLWERVFESVLFPIFDYVRHAIDPSGSSSEVNEVETDGQLDQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVNFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKEAANATLPNFSFLDSEDSVTRNHEHASMTEHDRDPAESGSHENLEILRTQQLYAYLSDAKCRAAVQLLLIQAVLEIYNMYRSQLTAKTILLLFEALHDVALHAHKINSNIILRSKLLEFGSVTQMQDPPLLRLENESYQICLTFLQNLVVDKPPSYDEVEVETRLVQLCQEVLEFYVEVAGSGRISESSQGRQQHWLIPLGTGKRRELAARAPIVVATLQAITNLGDISFEKNLAHFFPLLSNLISCEHGSIEVQVALSDMLSLSVGPLLLRSC 1760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01823 1760 CDD Sec7 592 774 IPR000904 GO:0005085|GO:0032012
Cca07g01823 1760 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 192 IPR032629 -
Cca07g01823 1760 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 8 40 - -
Cca07g01823 1760 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 43 1753 - -
Cca07g01823 1760 Pfam Domain of unknown function (DUF1981) 1143 1225 IPR015403 -
Cca07g01823 1760 ProSiteProfiles SEC7 domain profile. 585 772 IPR000904 GO:0005085|GO:0032012
Cca07g01823 1760 SUPERFAMILY ARM repeat 371 1485 IPR016024 -
Cca07g01823 1760 Gene3D - 667 787 IPR023394 -
Cca07g01823 1760 MobiDBLite consensus disorder prediction 553 582 - -
Cca07g01823 1760 MobiDBLite consensus disorder prediction 1282 1314 - -
Cca07g01823 1760 Pfam C-terminal region of Mon2 protein 1324 1402 IPR032817 -
Cca07g01823 1760 Gene3D - 585 666 - -
Cca07g01823 1760 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 320 479 IPR032691 -
Cca07g01823 1760 MobiDBLite consensus disorder prediction 1282 1306 - -
Cca07g01823 1760 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 8 40 - -
Cca07g01823 1760 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 43 1753 - -
Cca07g01823 1760 SUPERFAMILY Sec7 domain 589 782 IPR035999 GO:0005085|GO:0032012
Cca07g01823 1760 SMART sec7_5 589 774 IPR000904 GO:0005085|GO:0032012
Cca07g01823 1760 Pfam Sec7 domain 593 774 IPR000904 GO:0005085|GO:0032012
Cca07g01823 1760 Pfam BIG2 C-terminal domain 1551 1749 IPR046455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01823 Cca-Chr7 44826703 44838815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01823 K18442 - gmx:100789988 3239.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01823 07 44826703 44838815 Cca07g01823 07 44826703 44838815 ECH
Cca07g01823 07 44826703 44838815 Cca01g02119 01 48651557 48663750 PCT