Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02119 ATGGCTTCTTCGGAAGCCTATTCCCGTCTGAGCCAGGTGGTGGTGCCGGCGCTCGAGAAGATCGTGAAGAACGCGTCGTGGCGGAAGCACGCCAAGCTCGCGCACGAGTGCAAATCCGTCATCGAGAGGCTCAGCCACCAGAACTTGCCTCTTCCGCCGGGCTCGCCCTCCGACGCCGAGCCGGAACCCGCCGTACCCGGCCCGCTGCATGACGGCGGTCCGGTGGAGTACTCGCTCGCCGAATCCGAGTCCATCCTCGCGCCTCTCATCAATGCGGCCTCCTCCGGCGTCCTCAAGATCGCCGATCCCGCCGTCGACGCCGTCCAGAAGCTCATCGCGCACGGCTACCTCCGCGGCGAGGCGGACCCCGACCCCGGCGGCGCCGCGCCGGAGGCCAAGCTCCTCTCCAGTCTGATCGAATCGGTCTGCAAATGCCACGATTTCGGCGACGACGCGATGGAGCTGCTCGTGCTCAAGACGCTGCTCTCGGCGGTCACGTCGATTTCGCTGCGAATCCACGGCGATTCGCTGCTCCTCATTGTGCGGACGTGCTACGACATTTACCTCGTGAGTAAGAATGTGGTGAATCAGATCACGGCGAAGGCGTCGTTGATACAGATGCTGGTGATTGTGTTCCGCCGCATGGAGGCGGATTCCTCCACGGTGCCGGTTCAGCCGATTGTGGTGGCGGAGCTGATGGAGCCGGTGGAGAAGTCCGACGAGGACAATTCGATGACGCAGTTTGTGCAGGGTTTTATAACCAAGATAATGCAGGACATTGATGGCGTTTTGAACCCTACGACGCCGAGTGGAAAGGCTAGTTTGTTAGGTGGACACGACGGTGCGTTTGAGACCACCACGGTGGAGACTACGAACCCTACTGATTTGTTGGATTCGACTGATAAGGACATGTTGGATGCCAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTGGAGGGACGGAAGGGGGAGCTGGTGGACGGGGATGTGTTGGAGAGGGACGATGATATGGAGGTTCAGATTGGGAACAAGTTGAGGAGAGATGCTTTCTTGGTGTTTAGGGCGCTTTGTAAGTTGTCCATGAAGTCGCCGCCCAAGGAGGCAGCCGCGGACCCGCAGCTGATGAAGGGGAAGATTGTGGCTCTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGAGCTGTGTTCAGGACTAGTGAAAGCAGGTTTTTAGGTGCCATCAAGCAGTACTTATGTTTATCCTTGTTGAAGAACAGTGCGTCAACTCTTTTGATTGTGTTTCAGCTGTCATGCTCCATTTTCATCAGTCTGGTGTCAAGATTTAAAGCTGGACTGAAAGCAGAAATTGGAGTTTTTTTCCCTATGATAGTTCTTAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGGTGATAGTGCTTCGATTTCTGGATAAGCTTTGTGTTGATTCACAGATATTAGTTGACATATTTATCAACTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAATGGGCTTCTTAAAACTGCTCAAGGCGTCCCTCCTGGTGTAACAACAACACTTTTGCCACCTCAAGAAGCAACACTAAAACTTGAAGCCATGAAAAGCTTGGTTGCTGTTATAAAATCAATGGGAGATTGGATGAACAAACAATTGCGCATTCCTGACCCTCGTTCAGCCAAGAGTGTTTTAGCAACTGATAACAGTCCTGAAACTGGTGGTTTTACCATGATAAATGGGAATGGAGAAGACTCTGTCGATGGGTCTGACTCTCATTCGGAAGTCTCCAATGATGCATCTGATGTTTCAAATATTGAGCAACGGCGGGCATATAAACTGGAACTCCAGGAAGGTATATCACTTTTCAATAGGAAGCCTAAGAAAGGAATTGAGTTCCTCATCAATGCCAACAAGGTGGGTGATTCACCAGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATCGGTGATTATCTTGGAGAAAGGGAAGAGTTACCCTTGAAGGTAATGCATGCCTATGTGGACTCCTTTAACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCAAGGATTTAGACTGCCTGGTGAGGCGCAGAAAATTGATAGGATAATGGAAAAGTTTGCTGAGCGTTATTGCAAATGTAATCCAAAAGCCTTCTCTAGTGCTGACACGGCATATGTCCTTGCCTATTCTGTTATAATGCTCAATACAGATGCTCACAATCCTATGGTGAAGAACAAGATGTCAGCTGATGATTTCATTAGAAACAATCGTGGCATTGATGATGGAAAAGATCTTCCTGAGGAATACTTGAGGGCCTTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGAAAATGATGTGGCTTCTCAACAAAAACAGGCTGTGAACCCTAATCGACTTTTAGGTTTGGATAGTATATTGAATATTGTGATTCGTAAACGTTCAGATAAGAATATGGAGACCAGTGATGATCTTATTCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAGTCAATCTATTATGCAGCAACTGATGTTGTAATCCTGAGATTCATGATTGAGGTGTGCTGGGCACCAATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAGGTTGTAATATGTCTGTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCCGTTATGTCCATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCACTACATTCACCAGCAGATATTAAGCAGAAAAATATAGATGCAATTAAGGCAATAGTTTTTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAGCATATCTTGACTTGTGTCTCTCGGTTTGAACATCTACATCTTCTTGGAGAGGGGGCTCCACCTGATGCCACATTTTTTGCCTTTCCTCAGAATGATTCTGAAAAAGCAAAGCAAGCAAAGTCAACTATTCTTCCTGTTCTGAAAAAGAAGGGACCTGGGAGGATGCAGTATGCAGCTGCTTCATTGATGAGGGGTTCATATGATAGTGCTGGAATTGGCGGTAATGGTTCTGGAGCAGTCACATCAGAACAGGTGAACAATCTAGTTTCTAATTTAAATATGTTGGAACAAGTTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAAGCCATAGTAGATTTTGTTAGGGCTCTATGCAAGGTTTCAATCGAGGAACTGAGGTCTCAATCTGATCCACGGGTTTTCAGCCTTACAAAGATTGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTCTTTGTAACTATTGGTTGTTCTGCAAACCTTTCAATTGCGATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGGGAAGAGCTAGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAACTAATTATCAGATGTGTCTCTCAAATGGTTCTATCACGTGTCAATAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACAACCTTCACAGACTGTGTGAATTGTCTCATTGCATTTACCAATAGTAGATTCAATAAAGAGATTAGCTTAAATGCCATTGCTTTTCTTCGGTTCTGTGCGACAAAACTAGCAGCAGGAGACCTTGTTTCATCATCAAGGAATAAGGACAATGAAGTTATTGGAAAAATTTCCTCATCTTCACCTCAAATAGGAAAGGAGGGGAAACATGATAATGGAGAGGTGACTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTATCTGAGCTTAGCTTTGACCCAAGACCTGAGATTAGGAAGAGTGCCTTAGAGGTCCTGTTTGAAACCTTACGTAACCATGGCCATCTCTTTTCACTATCTTTATGGGAAAAAATATTTGAATCTATCCTATTTCCAATATTCGATTATGTTCGACATGCTATTGATCCTTCTGGGGGTAGTTCACCAGTCAATGAAGTAGAGGCTGATGGTGAGCTTGAACAAGATGCTTGGCTTTACGAGACATGCACGTTGGCCCTCCAATTGGTTGTAGATCTTTTTGTTAACTTTTACAACACTGTTAATCCACTTTTAAGAAAGGTGTTGATGCTGCTGGTTAGCTTTATAAAGCGTCCTCATCAAAGCCTTGCTGGCATTGGTATTGCTGCTTTTGTTCGTTTGATGAGTAATGCTGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCACTAAAAGAAGCAGCAAATGCAACACTTCCCAACTTTTTGTTTCTTGAAAATGAGGACTTCACTAGAAATCATGAACATGCTTCAACTGCTGAAGATGATAGAGATCTTGCCGAGTCTGGCTCCCCAGATAATTTAGAAAACCTGAGGCTTCATCGTCTTTATGCCCATTTAACTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGACGGAGATCTATAACATATATCGTTCTCACCTTTCAGCAAAAGCCATGCTAGTCATGTTTGATGCTTTGCATGATGTAGCATTACATGCGCACCGGATTAACGGCAATAATATACTACGTTCAAAGCTTCAAGAGTTTGGTTCTATGACTCAAATGCAAGACCCTCCACTCTTACGCCTTGAGAATGAATCATACCAGACCTGCCTTACATTTTTACAAAACCTCGTCGTTGACAAGCCTCCTAGTTACGAGGCAGATGAGGTTGAATCTCATCTCATTCGGCTTTGTCAGGAGGTTCTGGAGTGTTATATTGAAGTTGCAGGTTTTGGACAAAAATCTGAATCTTCTCATGGTAGACAGTCCCATTGGTTAATTCCCTTAGGCTCTGGGAAGAGGAGAGAATTGGCTGCACGTTCACCTCTCATTGTGGCTACACTGCAGGCAATTTGTACTTTGGGAGATATTTCTTTTGAGAAGAACTTGTCTCATTTCTTCCCTCTTATCTCTAGCTTGGTACGTTGTGAACATGGTTCCAAGGATGTTCAGGTTGCTCTCAGTGATATGCTTAGTTTATCAGTTGGTCCTGTTTTGCTTCACTCATGTTGA 5358 0.4425 MASSEAYSRLSQVVVPALEKIVKNASWRKHAKLAHECKSVIERLSHQNLPLPPGSPSDAEPEPAVPGPLHDGGPVEYSLAESESILAPLINAASSGVLKIADPAVDAVQKLIAHGYLRGEADPDPGGAAPEAKLLSSLIESVCKCHDFGDDAMELLVLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLVSKNVVNQITAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMEPVEKSDEDNSMTQFVQGFITKIMQDIDGVLNPTTPSGKASLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGDVLERDDDMEVQIGNKLRRDAFLVFRALCKLSMKSPPKEAAADPQLMKGKIVALELLKILLENAGAVFRTSESRFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFKAGLKAEIGVFFPMIVLRVLENVSQPNFQQKVIVLRFLDKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLEAMKSLVAVIKSMGDWMNKQLRIPDPRSAKSVLATDNSPETGGFTMINGNGEDSVDGSDSHSEVSNDASDVSNIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGDSPEDIAAFLKDASGLNKTLIGDYLGEREELPLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRALFERISRNEIKMKENDVASQQKQAVNPNRLLGLDSILNIVIRKRSDKNMETSDDLIRHMQEQFKEKARKTESIYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVICLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVFIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKAKQAKSTILPVLKKKGPGRMQYAAASLMRGSYDSAGIGGNGSGAVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIVDFVRALCKVSIEELRSQSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAAGDLVSSSRNKDNEVIGKISSSSPQIGKEGKHDNGEVTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALEVLFETLRNHGHLFSLSLWEKIFESILFPIFDYVRHAIDPSGGSSPVNEVEADGELEQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEAANATLPNFLFLENEDFTRNHEHASTAEDDRDLAESGSPDNLENLRLHRLYAHLTDAKCRAAVQLLLIQAVTEIYNIYRSHLSAKAMLVMFDALHDVALHAHRINGNNILRSKLQEFGSMTQMQDPPLLRLENESYQTCLTFLQNLVVDKPPSYEADEVESHLIRLCQEVLECYIEVAGFGQKSESSHGRQSHWLIPLGSGKRRELAARSPLIVATLQAICTLGDISFEKNLSHFFPLISSLVRCEHGSKDVQVALSDMLSLSVGPVLLHSC 1785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02119 1785 Pfam C-terminal region of Mon2 protein 1350 1411 IPR032817 -
Cca01g02119 1785 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1778 - -
Cca01g02119 1785 SUPERFAMILY ARM repeat 883 1515 IPR016024 -
Cca01g02119 1785 SMART sec7_5 616 801 IPR000904 GO:0005085|GO:0032012
Cca01g02119 1785 Pfam Sec7 domain 620 801 IPR000904 GO:0005085|GO:0032012
Cca01g02119 1785 Pfam Domain of unknown function (DUF1981) 1169 1251 IPR015403 -
Cca01g02119 1785 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 9 1778 - -
Cca01g02119 1785 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 347 506 IPR032691 -
Cca01g02119 1785 Pfam BIG2 C-terminal domain 1576 1774 IPR046455 -
Cca01g02119 1785 Gene3D - 611 693 - -
Cca01g02119 1785 SUPERFAMILY Sec7 domain 616 806 IPR035999 GO:0005085|GO:0032012
Cca01g02119 1785 MobiDBLite consensus disorder prediction 46 72 - -
Cca01g02119 1785 Gene3D - 694 815 IPR023394 -
Cca01g02119 1785 CDD Sec7 619 801 IPR000904 GO:0005085|GO:0032012
Cca01g02119 1785 ProSiteProfiles SEC7 domain profile. 612 799 IPR000904 GO:0005085|GO:0032012
Cca01g02119 1785 MobiDBLite consensus disorder prediction 578 609 - -
Cca01g02119 1785 Pfam Dimerisation and cyclophilin-binding domain of Mon2 7 218 IPR032629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02119 Cca-Chr1 48651557 48663750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02119 K18442 - gmx:100798955 3263.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01823 07 44826703 44838815 Cca01g02119 01 48651557 48663750 PCT