Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01722 ATGGAAATGGAAGGCGCTGACGTGGTTGAAACGACGTCGAATCGAGCGGAACGTGGTGAGAAGGAGAAGAGTTTGAGAACGGAGATTGATACTTCTGCGCCCTTTGAATCGGTGAAGGAAGCTGTCACTAAGTTTGGGGGTCTTGGTTATTGGAAGCCCCGTCTAAGTAAGATTACGTCTGTGGATTCTGATTCTGAGCAGCACCAAACAGAAGAGCTTGACGCAGAAAAACTGGAGAAGCAGGCTGTGGTATTGGAAAAAGAACTGATCCTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAATTGGAAAGTACCAAAAGGCTTGTAGAAGATTTGAAATCAAAGCTACAGAAGGAAGAATCTGAAGCAAATTTGAATCTTAAGATAAGCCAATGTGATCAAAAATCAGTTGTTGGGGACAAAGAAGAAAAGGAAAACCAAGTGAAACTTAGTGCTTTTCAACCTTCCAGGGAAGGTTTTATCCCCTCCCCTTCATCTGCTCCAGGCTTAATACTAATGGAATTGAAGCAGGCCAAATTGAACTTAACCAAAACCACTAATGACATTGCCGATGTCCGAGCTTCTGTCGAATCGCTTAATAAGAATTTAGAGAAGGAAAGAATCTCACTTGATAAAACACGCGAGAGATTAACTCAAAATTATTCAAAAATATCTTCTCTTGAGGAAGAGCTTATCCGAGCCAGACTAAGACTGCAAGTAGCAAAAGATGCTGAAATCAAAGGTGATACAGGTGATCATTCAGATGTTACAAGAGAGCTCCAGCGATTGAGTTCGGAGGCAGAGAATTTCAAAAGAATGGGAGAATCTGCAAAATCTGAAGTTTTGAGAACAATGTCTGAGATTGAACAGACAAAGACCATGATAAGAACCGCCGAAATCAGATTGGTTGCAGCCAGAAAAATGAAAGAAGCTGCAAGAGCTGCAGAAGCCTCTGCCCTTGCAGAAATTAATGCTTTATCTAATCATGAGAGTTCACCTGGAAATCAGGTTACTCTTTCATTTGAAGAGTACACTGCTCTGACGTGCAAAGCTCGAGATGCAGAGGAACAATCTAAGAAGAGAGTTGCAGGTGTTATGGTTGAAGTTGAAGAAGCAAATTTGTCAAACATGGACATTTTGAAAAGGGTAGGAGAAGCTACAGAGGAAGTTATAACCAACAAGAAGGCCCTTGAAGAAGCTCTAGAAAGAGTAGAAGCTGCAAATAAAGGCAAGGTAGCATTTGAAGAGGCTTTAAGAAATTGGCGATCAGATGGTCACAAAAGACGTTCTTCCATACATAATAACTTTCCCAAGTTCAAAAGCTCTTGTCCTTCTCATCATCGGCGAGATCCTGGATTACTCGATGTGAATGGATTGCATCTGGTGAATGATGAAGCCATGCCAGTTCTAAAGTCAACCCTATCAATAGGACAAGTACTTAGCAAGAAGCTGCTGGATCAGCCACAAAATGTGTCACTGGGTCAGATGCTTGGCAAACAGCACAATGATCCACCAGTTGATAGACAAGTTGAGAAAGAAACTGGCCATAATCTGTTTTCTACTAAGAGAAAGAAATTTGGATTTGCACGAATCTCGCATCTTTTGTCAAAACAGAAGAAGAAGCCTACACTAAATTTGAGATGA 1647 0.4117 MEMEGADVVETTSNRAERGEKEKSLRTEIDTSAPFESVKEAVTKFGGLGYWKPRLSKITSVDSDSEQHQTEELDAEKLEKQAVVLEKELILKERETLDVLKELESTKRLVEDLKSKLQKEESEANLNLKISQCDQKSVVGDKEEKENQVKLSAFQPSREGFIPSPSSAPGLILMELKQAKLNLTKTTNDIADVRASVESLNKNLEKERISLDKTRERLTQNYSKISSLEEELIRARLRLQVAKDAEIKGDTGDHSDVTRELQRLSSEAENFKRMGESAKSEVLRTMSEIEQTKTMIRTAEIRLVAARKMKEAARAAEASALAEINALSNHESSPGNQVTLSFEEYTALTCKARDAEEQSKKRVAGVMVEVEEANLSNMDILKRVGEATEEVITNKKALEEALERVEAANKGKVAFEEALRNWRSDGHKRRSSIHNNFPKFKSSCPSHHRRDPGLLDVNGLHLVNDEAMPVLKSTLSIGQVLSKKLLDQPQNVSLGQMLGKQHNDPPVDRQVEKETGHNLFSTKRKKFGFARISHLLSKQKKKPTLNLR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01722 548 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 13 542 - -
Cca07g01722 548 MobiDBLite consensus disorder prediction 427 447 - -
Cca07g01722 548 Coils Coil 61 95 - -
Cca07g01722 548 Coils Coil 388 418 - -
Cca07g01722 548 Pfam Weak chloroplast movement under blue light 174 429 IPR008545 -
Cca07g01722 548 Pfam Weak chloroplast movement under blue light 27 124 IPR008545 -
Cca07g01722 548 MobiDBLite consensus disorder prediction 1 28 - -
Cca07g01722 548 Coils Coil 254 281 - -
Cca07g01722 548 MobiDBLite consensus disorder prediction 11 28 - -
Cca07g01722 548 Coils Coil 100 123 - -
Cca07g01722 548 Coils Coil 183 245 - -
Cca07g01722 548 Gene3D - 172 333 - -
Cca07g01722 548 PANTHER MYOSIN HEAVY CHAIN-LIKE 13 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01722 Cca-Chr7 43282384 43286429 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01722 - - ccaj:109818256 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01722 07 43282384 43286429 Cca07g01722 07 43282384 43286429 ECH
Cca07g01722 07 43282384 43286429 Cca01g02003 01 46854257 46857337 PCT