Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01720 ATGTTCAGTTCCAAATCTGAGCTTTCCCAAAAGACAGTGCTCCAAATCAAGCAAGATGACAAATTCTTCTGCAGGCTTCTCTCAAAGGAAAGTTCCATGTCCAACCCTTCTTTCAGAGTGGCTGTGGCTGTGCCCTTTGTGTGGGAATCTCAACCTGGCACCCCAAAATACACTTTCTCTCATGACACTCTCCCTCCTCTCACTCCTCCACCCTCCTATTATGCCACTCGTGCAACAAAAAACAAGCCTGTGAAGAAACACTCAAGGTTCAATCTCTTGTTATCACTCTTCCCTAAACTGAATCTCAAGAAGACCATGAAtctctcaccctcttcctcttcctctctctcttctccttcaccctctctATGGTCTTCCTCGGATAATTCTTCCAAGGTTGTCCCTGAGGGGAGGGTTGGAAGGAAGCGTTTCCTAAGCTTTGGTTCATCTTTTGATCTTTGGGGAGAGGATGAAGAAGAGGGTGGTGCCACTTCTCCAACTTCAACACTTTGCTTTGGCATTTCTCGTTCCACAAGCACTCTTGCGGGTACTGGCTTCCGAGGCTCAAGCAGGAGCTGCACGAGCTTTTAA 591 0.4315 MFSSKSELSQKTVLQIKQDDKFFCRLLSKESSMSNPSFRVAVAVPFVWESQPGTPKYTFSHDTLPPLTPPPSYYATRATKNKPVKKHSRFNLLLSLFPKLNLKKTMNLSPSSSSSLSSPSPSLWSSSDNSSKVVPEGRVGRKRFLSFGSSFDLWGEDEEEGGATSPTSTLCFGISRSTSTLAGTGFRGSSRSCTSF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01720 196 MobiDBLite consensus disorder prediction 107 135 - -
Cca07g01720 196 PANTHER OS05G0165500 PROTEIN 1 180 - -
Cca07g01720 196 MobiDBLite consensus disorder prediction 107 133 - -
Cca07g01720 196 PANTHER EXPRESSED PROTEIN 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01720 Cca-Chr7 43243574 43244797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01720 - - gmx:100801292 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01720 07 43243574 43244797 Cca07g01720 07 43243574 43244797 ECH
Cca07g01720 07 43243574 43244797 Cca01g02001 01 46800969 46802059 PCT