Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02001 ATGGTTAATGCTAAATCCGATGTACCCCAGAAGAGTGTCCTTCAAATCAAGCAAGATGACAAATTCTTCTGCAGGCTACTTTCAAAGGAAAGTTCCATGTCCAACCCATCTTTCAGAATAGCCCTTGCAGTGCCATTTGTGTGGGAATCTCAGCCAGGAACCCCTAAGTACACATTCTCTGAGGACACTCTCCCTCCTCTAACTCCTCCACCTCCTTTTCACATGAACACTATCAATGCCTTAAAAAAGAAAGAGAAGAAACGCTCAAAGTCCAACATATTGCTGACCATGCTACCAAAGCTGAACCTCAAGAAGATGATTTTGTCATCTTCATACCCTTCATGGTCATCATCATCAAGCTCCTCCAAAGTTGTCCCTATGGCCAAGTTTGGCAAGAAGAAGCTCTTAGGCTATGGATCATCTAATGATAATGATCAAGGAGGTGGTTCTAGTTCACCCTCTTCCAAATTGTGCTTTACCGTTCCTCGTGCCACTAGTTCAGACAGCAGGTTCTGA 516 0.438 MVNAKSDVPQKSVLQIKQDDKFFCRLLSKESSMSNPSFRIALAVPFVWESQPGTPKYTFSEDTLPPLTPPPPFHMNTINALKKKEKKRSKSNILLTMLPKLNLKKMILSSSYPSWSSSSSSSKVVPMAKFGKKKLLGYGSSNDNDQGGGSSSPSSKLCFTVPRATSSDSRF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02001 171 PANTHER EXPRESSED PROTEIN 1 163 - -
Cca01g02001 171 MobiDBLite consensus disorder prediction 136 171 - -
Cca01g02001 171 MobiDBLite consensus disorder prediction 139 171 - -
Cca01g02001 171 PANTHER OS05G0165500 PROTEIN 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02001 Cca-Chr1 46800969 46802059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02001 - - ccaj:109814145 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01720 07 43243574 43244797 Cca01g02001 01 46800969 46802059 PCT