Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01656 ATGATGGGTTCCGTCTCTGACGAAAATGTTATACTGGGTCATGGGCTAAGTCTTTTGCATTGCAGAATTACAAAGACCAAAATCACTCTTTTTAAAATTGTGGAATACAATGCTTCCTATGTGTACCACTCCTTGTTTGCATACTTTGACAGGGATAACATCGCTCTCAAGGGACTTGCCAAGTTCTTCAAGGAATCTAGCGAAGAAGAAAGAGAGCATGCTGAAAAGCTTATGAAATATCAGAACACACGTGGTGGAAGAGTTGTACTTCACCCCATCAAGAATGTTCCCTCTGAATTTGAGCACGAGGAAAAGGGGGATGCATTGTATGCAATGGAATTGGCTTTGTCGTTGGAGAAGTTGGTGAATGAGAAACTTCTGAATGTGCACAGTGTGGCAGACCTCAACAATGACCCTCAAATGGCTGACTTCATCGAAAGTGAGTTTTTGTCTGAACAGGTTGAAGCAATTAAGAAGATATCAGAGTATGTGGCTCAATTGAGAAGGGTTGGAAAGGGTCACGGTGTTTGGCACTTTGATCAAAGACTTCTTCACGAGGGAAATGCTGCTTGA 573 0.4223 MMGSVSDENVILGHGLSLLHCRITKTKITLFKIVEYNASYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHEEKGDALYAMELALSLEKLVNEKLLNVHSVADLNNDPQMADFIESEFLSEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLLHEGNAA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01656 190 ProSitePatterns Ferritin iron-binding regions signature 2. 138 158 IPR014034 -
Cca07g01656 190 PANTHER FERRITIN 34 185 IPR001519 GO:0006826|GO:0006879|GO:0008199
Cca07g01656 190 SUPERFAMILY Ferritin-like 34 185 IPR009078 -
Cca07g01656 190 PANTHER FERRITIN-1, CHLOROPLASTIC 34 185 - -
Cca07g01656 190 CDD Euk_Ferritin 34 181 - -
Cca07g01656 190 Gene3D - 22 190 IPR012347 -
Cca07g01656 190 ProSitePatterns Ferritin iron-binding regions signature 1. 69 87 IPR014034 -
Cca07g01656 190 ProSiteProfiles Ferritin-like diiron domain profile. 18 171 IPR009040 -
Cca07g01656 190 Pfam Ferritin-like domain 35 170 IPR008331 GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01656 Cca-Chr7 41990245 41992469 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01656 K00522 - gmx:547824 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01656 07 41990245 41992469 Cca07g01656 07 41990245 41992469 ECH
Cca07g01656 07 41990245 41992469 Cca05g01296 05 30812480 30814599 ECH