Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01598 ATGGTGGGACCAGTGAGGCCTCAGTTTGTGCTCTTTGGTTCTTCCATTGTTCAACTCAGTTACTCTTACCAACACCAAGGTTGGGGCTCTATTCTTGCTCACTTGTACGCTCGTAAGGCGGATATAGTTCTGCGAGGATACTCTGGTTGGAATTCAAGGCGTGCTCTGCAGGTTTTGGATGAAATTTTCCCAAAGAATGCCACTGAGCAACCATCATTGGTAATTGTGTACTTTGGTGGTAATGATTCTCTTCTTCCGCATCCAAGTGGCCTTGGTCAGCATGTACCTCTCCAAGAATACATTGAAAATATGAGAAAGATTGCTGTCCATCTCAAGAGCCTTTCAAAGAAGACTCGCATTATATTTCTCAGTGCTCCTCCTGTCAATGAGGCACAAATTTATGGAAACAGTGTACCGGGGCAGCGATTAAGGACAAATGAATCTTGTCGAATATACTCAGAAGCATGTTTGGAGCTCTGTCGCGAGATGGATATCAAGGCAATTGATCTGTGGTCTGCACTCCAGAAAAGGGATGACTGGAGAGATGTTTGCTTCACGGATGGAGTTCATCTGACTTGTGAGGGGAGCAACATAGTGGCAAAAGAGATACTAAAGGTCCTCAAAGAAGCAGAATGGGAACCTAGCCTGCACTGGAAGTCAATGCCAACTGAATATGCAGAAGATTCACCTTATGATCCAATTGGCCCTGATGGAAAGACAAATATGAATATCTGCAACTGGACCTTCCTGGAAACTACAGAATGGGACTAG 771 0.4462 MVGPVRPQFVLFGSSIVQLSYSYQHQGWGSILAHLYARKADIVLRGYSGWNSRRALQVLDEIFPKNATEQPSLVIVYFGGNDSLLPHPSGLGQHVPLQEYIENMRKIAVHLKSLSKKTRIIFLSAPPVNEAQIYGNSVPGQRLRTNESCRIYSEACLELCREMDIKAIDLWSALQKRDDWRDVCFTDGVHLTCEGSNIVAKEILKVLKEAEWEPSLHWKSMPTEYAEDSPYDPIGPDGKTNMNICNWTFLETTEWD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01598 256 Pfam GDSL-like Lipase/Acylhydrolase family 11 195 IPR013830 -
Cca07g01598 256 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 253 IPR045136 -
Cca07g01598 256 Gene3D SGNH hydrolase 6 232 IPR036514 -
Cca07g01598 256 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
Cca07g01598 256 SUPERFAMILY SGNH hydrolase 6 208 - -
Cca07g01598 256 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01598 Cca-Chr7 40898358 40901819 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01598 K23978 - gmx:100817293 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01598 07 40898358 40901819 Cca01g01888 01 44176931 44182133 PCT