Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01552 ATGGACCAAACTCAAAATGAGTCTGGCTGGATGCATTCTATCAAAGTGACACTAGGATCTCTAGATCACAGAGAGGTTAAATCCTTCATAAGCAGCATCCCAAGTGTTTCAAGCAAGCTTAGAAAATCAAACGAGGAAGCTTACTCACCAAAGTTTGTAAGCATTGGACCCTTACACAGAGGAAGCAGGAGCCACCTTCTGGCCATGGAAGAGCATAAATGGCGCTATATGTTGGCTCTTCTTCACAGAACTCAAAATCCAGTTTCAACCTTGGATGAGTGTGGCACAGTGATTCTAGGCTTGGATGATGCAGTTCGTGCAAGCTATGGAGGTAACATCAAATATGAACCCCATGAGTTAGCCAAAATAATGTTACTTGATGGCTCCTTTTTGTTGGAACTTCTCTTTAGATGTGCTCCACCAAATATGGTACCTCAAATTCCAAAAGAAGATGGCCACAATGATTATTCTTCAGATCCAATTCTAGGACACAAAGATGTGTTCTTATCTATTCTCACTGATTTCACTCTACTAGAGAACCAACTTCCCTTTTTTGTTCTCAAAACATTGGCTAGGATACTTTTTCCCACAGTCTTCACAGGTGAGGCAGATCACCTTGTTGCTGATCTCACTCTTTCTCTCTTCAGCTACCCTTTGATCCGTTGTCCTAGTGTGGCACATTTTCTTCATCTCATGCACTTGTCCTCAATTGTTGACGAGGGGCAGAAGGTGAAACATTCTCAGCAAGAACTAAAGCGTTGTGCCACAAGGCTTAGAGCTGCTGGAGTAACAATTAGGAAAGTGGATAGGCACACCAAGCTGGTTAACTGGTTTGGCTTTGACATAAGATTTTCCAAAGGGGTGCTTGAAATCCCACCACTGCATGTAGTTGAAACAACTGAGGTCTATTTGAGGAACTTCATTGCATGGGAACAAAGCAGAATTGGTATCAACAGGCAATTCACTTCCTATGCTTTGTTTCTTAGAGGCTTGATGTGTTCCTTGCAAGATATTGAGCTGCTTGTGGACAATGGTGTGTTGGTGAAAGATACCAAGATCAGCAACAGAGATTTGCTCGCTTTGTTTGTAACAATCACAAAGGGAGTGGACCAAATGGACTCTAGTTACACTAAACTTTGTGAGGACTTGAATGCTTACTCAGCAGTGAACCCTTTGAAGAAGTTTCCTATATTGATGTGGCATTGTTGCAACCGTTGTGTAGAATTCATCAGATACTCTTGCAAACACAGCTATAAAATCTTGATTACAGATCATATCCCCAATGTGTGGAAATTGATAGGAATTGTGGTAGCTGCAGTGCTGCTTGCTCTTACCATTATGCAAACCTATTATTCAGCCCGTGGCTGA 1368 0.4196 MDQTQNESGWMHSIKVTLGSLDHREVKSFISSIPSVSSKLRKSNEEAYSPKFVSIGPLHRGSRSHLLAMEEHKWRYMLALLHRTQNPVSTLDECGTVILGLDDAVRASYGGNIKYEPHELAKIMLLDGSFLLELLFRCAPPNMVPQIPKEDGHNDYSSDPILGHKDVFLSILTDFTLLENQLPFFVLKTLARILFPTVFTGEADHLVADLTLSLFSYPLIRCPSVAHFLHLMHLSSIVDEGQKVKHSQQELKRCATRLRAAGVTIRKVDRHTKLVNWFGFDIRFSKGVLEIPPLHVVETTEVYLRNFIAWEQSRIGINRQFTSYALFLRGLMCSLQDIELLVDNGVLVKDTKISNRDLLALFVTITKGVDQMDSSYTKLCEDLNAYSAVNPLKKFPILMWHCCNRCVEFIRYSCKHSYKILITDHIPNVWKLIGIVVAAVLLALTIMQTYYSARG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01552 455 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 5 455 IPR004158 -
Cca07g01552 455 Pfam Plant protein of unknown function 33 444 IPR004158 -
Cca07g01552 455 PANTHER DUF247 DOMAIN PROTEIN 5 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01552 Cca-Chr7 40192376 40194194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01552 - - gmx:100810805 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01552 07 40192376 40194194 Cca07g01552 07 40192376 40194194 ECH
Cca07g01552 07 40192376 40194194 Cca01g01855 01 43377954 43379393 PCT