Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01855 ATGAGCCAATCCGACTCCAGTTGGATGCTTCCCATCGAGGTGATGCTGGGTTCCCTCTACCACGGCCAAGTCCAAGCCTGCAGTATTTCAACCGTCACCGACGAGCTTCGTGTCCCAAACGTCGCAGCCTTCAAGCCCAAAGAGGTCTCCATTGGACCCTTGCACAGAGGAACCACCCGCCACCTGCAGCGAATGGAAGAGACCAAATGGCGCTACATGCGCGAGTTCCTCGACCGGAAAGGTCCCCATGAGCAGCAAAATAGAAGATCAGAACAAAGGCTCCGAGAATGCGGCACCGACATCCTCAAATTAGAAAAATTAATTATCGCCAGTTACGGAGGTAACATCGAATCAGAGCCACAAGAACTGAGTAAAATAATGATAGTTGATGGTTGTTTTCTGTTAGAACTTCTCATAAGACTAAAAGATTTTATCAATGGtaatggtgatactaacaacaacaacactactattactaatactaacagtaacaacaacaataatacgaataattatTCCAATGATCCTATACTAAAAAACGAGGAGAAGATGGTGGCTGTTTTGAATGATATCACGAAGCTTGAGAATCAAATTCCCTTCATTGTTCTCAAGAAGTTGTATCGAAAGGTCTTCCCTGATGGTAGTAACATCGACGATGATCATCGCGTTGCGAATATTGTTCGCGAAGCATTTGGGTACAATGGTGTGGATAACTCGGGGGGTGTCCACATACTTCACTTGATGCACTTGTCCACAGTGGAGCAGAACCAGCAAGAGGGGAAACTCGCGAAGCAAGAGTTGTTGCGGTGTGCCACGAGGCTTGTAGCTGCTGGAATAGCGATTGAAGGTGGAAGCACAAGGAATCGCCATAGGTTGGTGGATTGGTTCAACTTTGAGATAAGTTTCGATGGTGAGGTGCTGCGGATTCCGCAGTTGTATGTTAAGGAAACGACGGAAGTGAGGTGGAGGAATTTGATTGCATGGGAGCAGAGCAAAATTTGGATAAGGTGTAAGTACACTTCGTATGCTTTGTTTTTCAAAGGTTTGGTTTGTTGTAAGCATGATGTTGAGCTGTTGAAAGAGAAGGGGGTTATAGTGAACGAGGCTGGGAAGAGCAATGAGGAATTGTTGAATCTGTTTCGAACGATTTCCAATGGAGCTGAGTACATGGATTCGAGTTATGAGGTGATTTGTGAGAGCTTGAACGCGCACAGAGTGAGGAATGTCAGAATAATGGCTTTGCAACAATTGCCTATTGTGACTTGGCATCGGTGCAGAGGGGTTTGTGAAACCATTGTTTACTATTGGTGGAACTGGTACAAAATTTTGATAAGGGATCATATCCCCACAGTGTGGAAATTCATAGGAGTTTTAGCAGCTGTTGCGCTCCTTGTTCTCACTTTTATACAGGCCTATTATGCTGTCCACCCCAATAAATGA 1440 0.4326 MSQSDSSWMLPIEVMLGSLYHGQVQACSISTVTDELRVPNVAAFKPKEVSIGPLHRGTTRHLQRMEETKWRYMREFLDRKGPHEQQNRRSEQRLRECGTDILKLEKLIIASYGGNIESEPQELSKIMIVDGCFLLELLIRLKDFINGNGDTNNNNTTITNTNSNNNNNTNNYSNDPILKNEEKMVAVLNDITKLENQIPFIVLKKLYRKVFPDGSNIDDDHRVANIVREAFGYNGVDNSGGVHILHLMHLSTVEQNQQEGKLAKQELLRCATRLVAAGIAIEGGSTRNRHRLVDWFNFEISFDGEVLRIPQLYVKETTEVRWRNLIAWEQSKIWIRCKYTSYALFFKGLVCCKHDVELLKEKGVIVNEAGKSNEELLNLFRTISNGAEYMDSSYEVICESLNAHRVRNVRIMALQQLPIVTWHRCRGVCETIVYYWWNWYKILIRDHIPTVWKFIGVLAAVALLVLTFIQAYYAVHPNK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01855 479 PANTHER DUF247 DOMAIN PROTEIN 3 475 - -
Cca01g01855 479 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 3 475 IPR004158 -
Cca01g01855 479 Coils Coil 177 197 - -
Cca01g01855 479 Pfam Plant protein of unknown function 29 466 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01855 Cca-Chr1 43377954 43379393 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01855 - - ccaj:109791652 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01552 07 40192376 40194194 Cca01g01855 01 43377954 43379393 PCT