Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01518 ATGGTGGGTGGTGGCAATTCCAAATCCGACATCTCCTTCGCTGGCACATTCGCCAGCAGTGCTTTCGCTGCATGTTTCGCCGAGGTGTGTACTATTCCTTTGGACACTGCCAAAGTTAGGCTTCAGCTTCAAAAACAGGTTATAGTTGGTGATGCAGTGACCTTACCTAAATATAGGGGTTTGATGGGAACGGTTGCAACCATTGCCAGAGAAGAAGGTCTTGCAGCACTCTGGAAGGGGATTGTGCCAGGGCTACATCGTCAATGTTTGAATGGTGGTTTGAGAATTGCGTTATATGAGCCTGTTAAGAATTTCTATGTTGGAGCTGACCATGTTGGAGATGTTCCATTGTACAAGAAAATTCTTGCTGGATTTACAACTGGTGCTATAGCAATTTCAGTGGCCAATCCAACTGATCTTGTGAAAGTCAGACTTCAAGCAGAAGGAAAATTACCTACCGGTGTGCCTAGGCGCTACTCTGGATCATTAAATGCTTATTCAACAATTGTGAGACAGGAAGGAGTTGGAGCGCTTTGGACTGGAATTGGTCCCAACATAGCAAGAAATGGTATCATTAACGCTGCTGAACTAGCCAGCTATGATCAAGTGAAACAGACTATTTTGAAAATTCCAGGATTCACCGACAATGTTGTCACTCATCTTCTTGCTGGTCTAGGGGCAGGGTTTTTTGCAGTCTGTGTTGGCTCCCCTGTCGATGTGGTTAAGTCGAGAATGATGGGAGATTCTAGTTACAAAAGCACCCTTGATTGTTTCGTCAAGACATTAAAAAATGATGGACCTTTTGCCTTTTATAAGGGGTTCATACCAAATTTTGGACGGTTAGGATCTTGGAATGTGATAATGTTCTTGACTCTAGAACAGGCTAAAAAGTTCGTCAAAAGCTTAGAATCAGCTTGA 918 0.4346 MVGGGNSKSDISFAGTFASSAFAACFAEVCTIPLDTAKVRLQLQKQVIVGDAVTLPKYRGLMGTVATIAREEGLAALWKGIVPGLHRQCLNGGLRIALYEPVKNFYVGADHVGDVPLYKKILAGFTTGAIAISVANPTDLVKVRLQAEGKLPTGVPRRYSGSLNAYSTIVRQEGVGALWTGIGPNIARNGIINAAELASYDQVKQTILKIPGFTDNVVTHLLAGLGAGFFAVCVGSPVDVVKSRMMGDSSYKSTLDCFVKTLKNDGPFAFYKGFIPNFGRLGSWNVIMFLTLEQAKKFVKSLESA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01518 305 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 1 5 299 - -
Cca07g01518 305 Gene3D Mitochondrial carrier domain 14 304 IPR023395 -
Cca07g01518 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 298 IPR018108 -
Cca07g01518 305 PRINTS Mitochondrial brown fat uncoupling protein signature 18 30 IPR002030 GO:0006839|GO:0031966
Cca07g01518 305 PRINTS Mitochondrial brown fat uncoupling protein signature 46 65 IPR002030 GO:0006839|GO:0031966
Cca07g01518 305 PRINTS Mitochondrial brown fat uncoupling protein signature 99 111 IPR002030 GO:0006839|GO:0031966
Cca07g01518 305 PRINTS Mitochondrial brown fat uncoupling protein signature 169 186 IPR002030 GO:0006839|GO:0031966
Cca07g01518 305 PRINTS Mitochondrial brown fat uncoupling protein signature 212 230 IPR002030 GO:0006839|GO:0031966
Cca07g01518 305 PRINTS Mitochondrial brown fat uncoupling protein signature 287 305 IPR002030 GO:0006839|GO:0031966
Cca07g01518 305 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 5 299 - -
Cca07g01518 305 SUPERFAMILY Mitochondrial carrier 10 294 IPR023395 -
Cca07g01518 305 Pfam Mitochondrial carrier protein 10 107 IPR018108 -
Cca07g01518 305 Pfam Mitochondrial carrier protein 216 300 IPR018108 -
Cca07g01518 305 Pfam Mitochondrial carrier protein 114 209 IPR018108 -
Cca07g01518 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 105 IPR018108 -
Cca07g01518 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 206 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01518 Cca-Chr7 39337661 39342649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01518 1 305 Miscellaneous Gene Families AT3G54110 81.699 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01518 K15103 - gmx:100802540 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01518 07 39337661 39342649 Cca07g01518 07 39337661 39342649 ECH
Cca07g01518 07 39337661 39342649 Cca01g01803 01 42141435 42145213 PCT