Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01465 ATGGAGAAGGTGAGTGTGGAAGTAAAACCAGAAGAGGGTGATGAGATGAAATGGGTTCATGATTCTTCACTGGACCACAAAGGCATGGTTCCACTCCGAGCTTCAACTGGTTCTTGGAAAGCTGCTCTCTTCATTATTGCAATTGAGACTAGTGAGAGGTTGAGCTACTTTGGAATAGCAACCAGTTTGGTTCTTTACCTGACAAAGGTTATGCATCAAGAACTCAAGACAGCAGCAAGAAATGTGAACTACTGGTCTGGTGTCACAACTTTGATGCCACTGTTTGGTGGATTCATAGCCGATGCATACTTGGGTCGTTACTCCACTGTGCTCGCATCATCCATTGTTTATCTCGTAGGTTTGATTCTCCTTACTCTTTCTTGGTTCTTACCAAGCTTAAAGCCATGTGATCACACAAACATGTGCGCTGAACCTAGGAGAATTCATGAAGTGATTTTCTTCCTTGCCATCTACTTAATATCTATTGGAACTGGAGGGCACAAACCTTCCTTGGAGAGCTTTGGGGCTGATCAATTTGATGAGGATCATGATGAAGAAAGGAGGCAAAAAATGTCCTTTTTCAATTGGTGGAATTGTGCACTATGCAGTGGACTTATTCTTGGAGTGACCCTCATTGTTTACATTCAAGACAACATAAACTGGGGTGCTGCTGATATTATCTTCACTGTGGTCATGGCTTTTTCACTGCTCATCTTCATAATAGGAAGACCATTTTATCGTTATAGGGTACCAACTGGGAGTCCCTTGACTCCAATGTTGCAGGTTCTTGTTGCTGCCATTTCCAAAAGAAAGCTTCCATATCCTTCTAACCCTGCTCAATTGTATGAAGTTCCCAAGTCTCTAAGCAACAATAGGAGATTTCTCTGTCACACTAACAAACTCAAATTTCTTGACAAGGCAGCAATTCTTGCTAGTGATGGAAGTTCAGCAGAGAAGCAGAGTCCATGGAACCTAGCAACTGTGACTAAGGTTGAAGAAATGAAGCTTATAATCAACATAATCCCCATTTGGTTATCTACCTTACCTTTCGGTATATGTGTGGCACAAACATCCACATTCTTCATCAAACAAGGTACCAAGTTGAACAGAAAGGTAGGCAATGGATTTGAGATTCCTCCAGCTTCAATCTTCACCTTTGCTGCCTTGGGGATGGTGATTTCTGTGACCATATATGACAAGATTCTTGTACCTGTGTTAAGAAAACTAACTCAAAACGAGAGAGGAATCAACATTCTTCAGAGGATTGGTTTTGGAATGCTTTTCTCTGTTGGCACAATGATAGTAGCTGCTTTGGTGGAGAAAAAGAGGCTTGAAGCTGTTGAGAGGGATCCACTGAAGGGTTCACTAACAATGAGTGTCTTCTGGTTGGCACCACAGTTTCTCATCATTGGCTTTGGTGATGGGTTCACTCTTGTGGGGTTGCAAGAGTACTTTTATGACCAAGTTCCTGACTCAATGAGAAGCCTTGGCATAGCATTTTACCTTAGTGTAATTGGGGCAGCGAGTTTCCTAAGTAGCATGCTAATAACAGTTGTTGATCACATGACAAAGAAGAGTGGGAAGAGTTGGTTTGGGAAGGATTTGAATAGTAGTCGCTTGGACAAATTCTATTGGCTTTTGGCAGCCATAACCACTGTGAATTTCTTCTTGTTTGTGTTTGTTGCTCGTCGATATTCATACAAAAATGTGCAAAAGGTAGCAGTGGCTGATTGCTATGAAGGGAAAAGTGATAGTGAGGGTGTGGAAACCAAGGTTTAG 1779 0.4193 MEKVSVEVKPEEGDEMKWVHDSSLDHKGMVPLRASTGSWKAALFIIAIETSERLSYFGIATSLVLYLTKVMHQELKTAARNVNYWSGVTTLMPLFGGFIADAYLGRYSTVLASSIVYLVGLILLTLSWFLPSLKPCDHTNMCAEPRRIHEVIFFLAIYLISIGTGGHKPSLESFGADQFDEDHDEERRQKMSFFNWWNCALCSGLILGVTLIVYIQDNINWGAADIIFTVVMAFSLLIFIIGRPFYRYRVPTGSPLTPMLQVLVAAISKRKLPYPSNPAQLYEVPKSLSNNRRFLCHTNKLKFLDKAAILASDGSSAEKQSPWNLATVTKVEEMKLIINIIPIWLSTLPFGICVAQTSTFFIKQGTKLNRKVGNGFEIPPASIFTFAALGMVISVTIYDKILVPVLRKLTQNERGINILQRIGFGMLFSVGTMIVAALVEKKRLEAVERDPLKGSLTMSVFWLAPQFLIIGFGDGFTLVGLQEYFYDQVPDSMRSLGIAFYLSVIGAASFLSSMLITVVDHMTKKSGKSWFGKDLNSSRLDKFYWLLAAITTVNFFLFVFVARRYSYKNVQKVAVADCYEGKSDSEGVETKV 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01465 592 CDD MFS_NPF5 39 567 IPR044739 GO:0042937|GO:0042938|GO:0071916
Cca07g01465 592 Gene3D MFS general substrate transporter like domains 11 574 IPR036259 -
Cca07g01465 592 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 21 577 - -
Cca07g01465 592 SUPERFAMILY MFS general substrate transporter 33 569 IPR036259 -
Cca07g01465 592 Pfam POT family 107 526 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca07g01465 592 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 96 120 IPR018456 GO:0006857|GO:0016020|GO:0022857
Cca07g01465 592 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 577 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01465 Cca-Chr7 38311139 38318688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01465 1 586 Organic Solute Cotransporters AT3G53960 62.838 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01465 - - gmx:100801757 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01465 07 38311139 38318688 Cca07g01465 07 38311139 38318688 ECH
Cca07g01465 07 38311139 38318688 Cca01g01736 01 40596203 40602989 PCT