Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01736 ATGGAGAAGACCAAGGTTGTTGCAAATTCTGAGGATGTTAAGGATGAGATGAAATGGGTTCGTGATTCTTCATTGGATCACAAAGGAAGAGTTCCTCTTCGAGATTCCACTGGTTCATGGAAAGCTTCTCTCTTCATTATTGCAATTGAGTTTAGTGAGAGATTGAGCTACTTCGGAATAGCAACTAGCTTGGTTCTTTACCTTACCAAAGTTATTCATCAAGATCTTAAGACAGCAGTTAAGAATGTGAACTATTGGGCTGGTGTCACCACTTTGATGCCATTGTTTGGAGGATTCCTAGCTGATGCATACTTAGGCCGTTACACCACTGTGATAGCATCATGCATTGTTTATCTCATGGGTTTGGTTCTGCTTTGTCTGTCATGGTTTTTACCAGGTTTGAAACCATGTGATCATGCTAATACATGCACTGAACCTAGGAGGATTCATGAAGTGGTTTTCTTCCTAGGAATCTATTTAATATCCATAGGAACTGGGGGGCACAAGCCTTCTTTGGAGAGCTTTGGTGCTGATCAATTTGATGATAACCATGCTAAAGAAAGAAGGCAAAAAATGTCCTTTTTCAATTGGTGGAACACTGGTTTGTGCAGTGGAATAATTCTAGGAGTTACTGTGATTGTTTATGTACAAGACCATGTAAATTGGGGAGTTGCTGATATGATCCTCACAGGGGTCATGACTATCTCATTGCTCATATTCTTGATAGGAAGGTCTTCTTATCGTTATAGGGCACCAATTGGAAGTCCCCTCACTCCTATGTTACAAGTTCTTGTTGCTGCCATTTCCAAAAGAAAGCTTCCATATCCTTCCAATCCAACTCAGCTCTATGAAGTTTCCAAGTCTGAGGGCGATAGTGAAAGGTTTCTGGCTCATACCAAGAAACTCAAATTTCTAGACAAGGCAGCAATTCTTGAAAATGAAGGGAACATAGGGGAGAAACAGAATCCATGGAGGCTTGCAACCGTAACTAAGGTTGAAGAACTGAAGCTTATCATCAACATGATCCCCATTTGGGTATTCACTTTACCTTTCGGAATCTGTGCTTCACAAACCTCCACCTTCTTCATCAAACAAGGTGCCATCATGAACAGGAAGTTAGGCAACAACTTTGAGGTTCCTCCAGCTTCAATTTTCACTCTTGCCGCCATTGGGATGATATTTTCAGTGACCATTTACGACAAGCTCCTAGTGCCAATGCTAAGAAGAATAACAGGAAATGAAAGAGGAATCAACATTCTTCAAAGGATTGGCATTGGAATGTTTTTCTCAATTGTGACAATGGTAGTGGCAGCTTTGGTTGAGAGAAAGAGGCTTGGGGCTGTTGAGATGAATGGCCCATTAAAGGGTTCTTTGTCAATGAGTGCCCTTTGGTTGGCCCCACAATTTATGATCATTGGATTTGGTGATGGGTTTGCTCTTGTGGGCTTGCAAGAGTATTTCTATGACCAAGTGCCTGACTCAATGAGAAGCTTGGGAATAGCACTTTACCTTAGTGTCATTGGGGCTGCTAGTTTTCTTAGTAGTTTGTTGATAACAATTGTTGATCATGTGACAGGTAAGAGTGGGAAGAGTTGGATTGGTAAGGATTTGAATAGTAGCAGGTTGGACAAGTTTTATTGGCTACTTGCAGCTATGACCACTTTGAACTTGTTTGTGTTTGTGTTCTTTGCTCGCAAGTATAACTACAAGAATGTGCAAAAGGTGGTTGTGGCTGATTGTTATGAAGGCAAGAGTGATGATTGTGGAGCAGAGAGTAAGGTTTGA 1785 0.4123 MEKTKVVANSEDVKDEMKWVRDSSLDHKGRVPLRDSTGSWKASLFIIAIEFSERLSYFGIATSLVLYLTKVIHQDLKTAVKNVNYWAGVTTLMPLFGGFLADAYLGRYTTVIASCIVYLMGLVLLCLSWFLPGLKPCDHANTCTEPRRIHEVVFFLGIYLISIGTGGHKPSLESFGADQFDDNHAKERRQKMSFFNWWNTGLCSGIILGVTVIVYVQDHVNWGVADMILTGVMTISLLIFLIGRSSYRYRAPIGSPLTPMLQVLVAAISKRKLPYPSNPTQLYEVSKSEGDSERFLAHTKKLKFLDKAAILENEGNIGEKQNPWRLATVTKVEELKLIINMIPIWVFTLPFGICASQTSTFFIKQGAIMNRKLGNNFEVPPASIFTLAAIGMIFSVTIYDKLLVPMLRRITGNERGINILQRIGIGMFFSIVTMVVAALVERKRLGAVEMNGPLKGSLSMSALWLAPQFMIIGFGDGFALVGLQEYFYDQVPDSMRSLGIALYLSVIGAASFLSSLLITIVDHVTGKSGKSWIGKDLNSSRLDKFYWLLAAMTTLNLFVFVFFARKYNYKNVQKVVVADCYEGKSDDCGAESKV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01736 594 Gene3D MFS general substrate transporter like domains 11 576 IPR036259 -
Cca01g01736 594 SUPERFAMILY MFS general substrate transporter 34 568 IPR036259 -
Cca01g01736 594 CDD MFS_NPF5 40 569 IPR044739 GO:0042937|GO:0042938|GO:0071916
Cca01g01736 594 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 22 584 - -
Cca01g01736 594 Pfam POT family 108 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g01736 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 584 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01736 Cca-Chr1 40596203 40602989 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01736 1 579 Organic Solute Cotransporters AT3G53960 64.164 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01736 - - gmx:100806045 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01736 01 40596203 40602989 Cca01g01736 01 40596203 40602989 ECH
Cca07g01465 07 38311139 38318688 Cca01g01736 01 40596203 40602989 PCT