Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01441 ATGGCCGAATCAAAGTTGAGTTGCTTCAAAGACGAAAGGTGGTCACTTCATGGCAAGACAGCTCTAGTAACAGGAGGCACCAAAGGCATAGGGCACGCTATAGTAGAAGAGTTAGCAGAATTTGGAGCAGCAGTGCATGTATGTGCACGTAATCAACAAGATATTGATAAATGTGTAGAAGAATGGAAAAACAAAGGATTTCGCATAACAGGAACCGCATGTGATGTACTATCTCCTGAGCAACGTGAAAACTTAATGAAAAATGTTGCTTCAATTTTTCATGGAAAGCTCAACATTCTGATAAACAATGTTGGAACAACTACACCTAAGAGTCTCATAGATTATACTGCAGAAGATGTAAAGAAAATTATGGGAACTAATTTTGAGTCTAGTTACCACCTATGTCAGTTAGCACATCCACTTCTAAAAGCATCTGGAAATGGGAGTATAGTATTTATATCTTCCATTGCAGGTGTCAAAGCCTTTCCTCATAGTTCTGTCTATTCATCTTCTAAAGGAGCCATGAATCAATTCACCAAAAGCGTAGCATTGGAATGGGCAAAGGATAATATTCGTGCAAATGCAGTGGCACCTGGACCTGTTATTACCCCACTTCTAGATTCAATCACGAATTCTTCTGGAGGGGATGACTCTATCAATGGAGCAGTGTCTCGAACACTTGTTGGTCGCATGGGAGAACCTAAGGAGATATCATCACTTGTCGCTTTTCTTTGTCTTCCAGCTGCATCATACATCACTGGACAAGTTATTTGTGCCGACGGGGTGGCAGCATCACAAACACTGGCACTCTCATTGAATCGCTCTTGTGGCCATGAGCAACCGATGAAGAATGAACCTTCTCCATTTTCTCGTTGGTGTGTCAAACGCCCATGGACCACCACGCCCGCCCCAAGGCCGCTTCTGCCTCCGCCGGCCACGGAGCCACAATTGAAAAATCACGGGCGGAAGCGACGTGGTCGAGGCCCTGGCCTGATTCAACCACAGAAAGAAGACGGCGGCTTTGATGTCCTCTCCCTCTCCGCCATGCTCTTCCTCCACGCCTCGCCGGCGGTCGCGCTCTCCACCTTTGCGACTCGCCGGCCCACAAGACCAGATTGTCGGCGAGAAAGAACGGGGAAAAGAGGAAAGAAACAGAAAGCTAAAAAGAAGCCAGAAAGATACGAAATTATAAAACGAGAACTTCAATTGTGA 1212 0.4571 MAESKLSCFKDERWSLHGKTALVTGGTKGIGHAIVEELAEFGAAVHVCARNQQDIDKCVEEWKNKGFRITGTACDVLSPEQRENLMKNVASIFHGKLNILINNVGTTTPKSLIDYTAEDVKKIMGTNFESSYHLCQLAHPLLKASGNGSIVFISSIAGVKAFPHSSVYSSSKGAMNQFTKSVALEWAKDNIRANAVAPGPVITPLLDSITNSSGGDDSINGAVSRTLVGRMGEPKEISSLVAFLCLPAASYITGQVICADGVAASQTLALSLNRSCGHEQPMKNEPSPFSRWCVKRPWTTTPAPRPLLPPPATEPQLKNHGRKRRGRGPGLIQPQKEDGGFDVLSLSAMLFLHASPAVALSTFATRRPTRPDCRRERTGKRGKKQKAKKKPERYEIIKRELQL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01441 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 261 IPR036291 -
Cca07g01441 403 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 1 262 - -
Cca07g01441 403 Gene3D - 2 265 - -
Cca07g01441 403 Pfam Enoyl-(Acyl carrier protein) reductase 27 261 - -
Cca07g01441 403 MobiDBLite consensus disorder prediction 389 403 - -
Cca07g01441 403 PANTHER TROPINONE REDUCTASE 1 262 IPR045000 GO:0016491
Cca07g01441 403 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
Cca07g01441 403 MobiDBLite consensus disorder prediction 300 338 - -
Cca07g01441 403 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Cca07g01441 403 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Cca07g01441 403 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Cca07g01441 403 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Cca07g01441 403 PRINTS Glucose/ribitol dehydrogenase family signature 227 247 IPR002347 -
Cca07g01441 403 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Cca07g01441 403 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Cca07g01441 403 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Cca07g01441 403 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Cca07g01441 403 MobiDBLite consensus disorder prediction 363 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01441 Cca-Chr7 37721975 37766340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01441 11 261 Miscellaneous Gene Families AT2G29330 56.972 6.90e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01441 K08081 - gmx:100306108 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01441 07 37721975 37766340 Cca07g01441 07 37721975 37766340 ECH
Cca07g01441 07 37721975 37766340 Cca04g00600 04 5979340 5982811 ECH