Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01408 ATGGAGTACGAGGGCCGCTTCAGACAGAACCAGAGATCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCACTAAGCTCTGGTATTGCAAAAGCATGTGGCCAAAATATTAAAGGTGAGTGTGTCTTTGCCAATAATGTTATTAGTAATGTGTTTACACTATGCTTGTTTGTTGTTAACATGAGTGGTACCATTGATCTAGACTATATGGTGGAAAAGCTTGGCATAGAGAGAAGCAAAATTAATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACGACCATGGCTGGATTAAGGGCAATTGGATACGACTTTGACTATGATGAATACCACAGTTTTGTTCATGGGAGATTACCTTATGAGAATTTGAAACCAGACCCGGTTCTGAGGAACCTCTTGATGAGTCTTCCATATAAGAAACTGATCTTCACAAACTCAGACAAGGTACATGCAGTGAAGGCACTTAGCAGGCTTGGATTGGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAAAGCACTGTCTCTGATGATGAAGATGACATTGAGTTTGTGGGAACCAATCCAACCACAAAAAAAGAAGCTAGTACCTTTCAAATCTTTGACATCATTACCCATTTTGCTCAACCCAATCCCAACACAGTTTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCTATTGAGTTGGCTCTCAAGATTGCCAACCTTAACCCACAAAGAACTGTAAGAAAAACAACCCTATTTTACTTGCATTCTTATCTCATAGAGTTAACAACACAATCTCAGACATATTTCTTCCATTACACATTTTATTATTGGTCAAAATTCGTTGGAGACGATGAAAATATGAGTGGAACATATTAA 906 0.3808 MEYEGRFRQNQRSKYDCLLFDLDDTLYPLSSGIAKACGQNIKGECVFANNVISNVFTLCLFVVNMSGTIDLDYMVEKLGIERSKINDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLMSLPYKKLIFTNSDKVHAVKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGTNPTTKKEASTFQIFDIITHFAQPNPNTVLPKTPIICKPSENAIELALKIANLNPQRTVRKTTLFYLHSYLIELTTQSQTYFFHYTFYYWSKFVGDDENMSGTY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01408 301 SUPERFAMILY HAD-like 13 256 IPR036412 -
Cca07g01408 301 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 72 256 - -
Cca07g01408 301 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 72 256 - -
Cca07g01408 301 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 44 - -
Cca07g01408 301 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 44 - -
Cca07g01408 301 Gene3D - 110 280 IPR023214 -
Cca07g01408 301 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 72 256 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01408 Cca-Chr7 37028433 37031396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01408 K07025 - gmx:100795391 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01408 07 37028433 37031396 Cca07g01408 07 37028433 37031396 ECH
Cca07g01408 07 37028433 37031396 Cca01g01689 01 38775258 38778786 PCT