Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01282 ATGGATTACACCAATGACAAGGAGCCATGGGATTGGCATAGGGAGGACTATTATCTGCAAAAGAGTTTCAATTACGAAATTTCTCAAGGACTGTGGAATGAAGCTCCTCAAAATGAAGATCTTTCCTATGTGTTCAATGATGAAACAACCCCAGTGAAGGCTTGTGGGGATTTTGCATACAATGATAATAATAGTGAGTCAAATAATATGGAAAAGGAGCCAGACAAATGTTTGAAGACTTCTTACCAAATTAAGAGACGGCGGATGCTACAATTCAATACTCAAGATGGGGAGCATTCCCCTTCCAATGAAAATTTGTGTTCAGCATATTTGAAAGTAAAGGGGAAGGAGGACTCAAATGAGGATGTTTTCTCAGAACTACCACAATGGATACCGGGGGCATCAGGGAGTGCATCTGCTTCCAGTTACGAGGAACTTGAGTCAGCTGAAGGGTGGCTAGCAGATTGCTTTAAGGATACCGAAATGCAATTATGTCCTGAGGATTTGTATGCTTCTAAAGACCACCACTAA 531 0.4124 MDYTNDKEPWDWHREDYYLQKSFNYEISQGLWNEAPQNEDLSYVFNDETTPVKACGDFAYNDNNSESNNMEKEPDKCLKTSYQIKRRRMLQFNTQDGEHSPSNENLCSAYLKVKGKEDSNEDVFSELPQWIPGASGSASASSYEELESAEGWLADCFKDTEMQLCPEDLYASKDHH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01282 176 PANTHER PROTEIN XRI1 1 172 IPR039933 GO:0007140|GO:0007143
Cca07g01282 176 PANTHER INDUCED TRANSCRIPT PROTEIN, PUTATIVE-RELATED 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01282 Cca-Chr7 32981801 32985911 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01282 - - pvu:PHAVU_008G128100g 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01282 07 32981801 32985911 Cca01g01263 01 22225405 22232415 PCT