Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01263 ATGGATTATAACAACAATGACGGTGGTGCTAGGGAGCCATGGGATTGGCAAGGGGAAGATTATGGTCTCCAGAAGACTTCCGATTTTGAAATTTCAGAAGAGCTGTGGAATGATGTTCCTCAAAATGAAGAAGATCTTTCTTACATGTTGGATGATGAAACAACCCCAGTTAAGGCCTGTGGTGATTTGGCATATAATGTTAATAATGGTGATTCAAATATACAAAAGGAACTAGAGGAATGTAGGGAGACATATTCGCAAGTCAAGAGGCGGCGGATGCTACAGTTCAACAGCCAAGACAGGGATGAATCTCTATCCAATGAAGAGATGTCTTTGTCATATTTGAAAAATGGGAAGGAGGACCCAATTAAGGATATTTTTCCAGAAGTGTCGCAATGGATGTCGGGGGCATCAGATTACACATTAGGAAGTGCATCTGCTTCTGGTTATGTGGAGCTTGAATCAACTGAAAGGTGGCTAGCAGAATACTTTAATGATGCTGAGATGGATATTTGTTCTGAGGAATTCAATTTTTCAGGGTTAGATGATGTTCAAATTGATGTTGCAGAGCTTAGTGCCGTCACACCATCACATGAACAAAATGCTGTTCAAAAGCTTGTCCCTCGAACCCCCAGAAATATTATCTTCAAAGGTAGGAAATCTTTTATACACACGCCTACAAAGTTGGCTTCTTCTGTGGCCTATCCATTTGCCTTCATTAAACCCAGTGGTGCCCATGGAGATGTAACTCTGAAGGAAATAAATCAGCGCATTCGAACACCGCCTCCGTTGAAAGCAAAGGAAAGCATTGATGATCCATCTGCTTACCCCAAGTCAGCCTTCTCAGGGAAGCCTGTGGTTGGTAAAACAAAAATTCGCACTGAAGGGGGGAAAGGTAGCATCACAATTATGAGAACTAAAGATCTAAACAAAAGGAAGGATGAAATGCCTATCATAAGCACCATGTCTTATCCTACTAAGGTTAAACTGTGCAGTTTTCCAGTGATGATCACTAAGGCTTATAGGCTGAAGATGTACGATAGGGAGTATGCAAAGCTCAATGTTCAGAAGTTCTACTTGCAACATATGTTCCAATCTTCTAAGCTTACATCATCTAGTAGCTCTTAA 1128 0.4113 MDYNNNDGGAREPWDWQGEDYGLQKTSDFEISEELWNDVPQNEEDLSYMLDDETTPVKACGDLAYNVNNGDSNIQKELEECRETYSQVKRRRMLQFNSQDRDESLSNEEMSLSYLKNGKEDPIKDIFPEVSQWMSGASDYTLGSASASGYVELESTERWLAEYFNDAEMDICSEEFNFSGLDDVQIDVAELSAVTPSHEQNAVQKLVPRTPRNIIFKGRKSFIHTPTKLASSVAYPFAFIKPSGAHGDVTLKEINQRIRTPPPLKAKESIDDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKDLNKRKDEMPIISTMSYPTKVKLCSFPVMITKAYRLKMYDREYAKLNVQKFYLQHMFQSSKLTSSSSS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01263 375 PANTHER PROTEIN XRI1 1 307 IPR039933 GO:0007140|GO:0007143
Cca01g01263 375 PANTHER INDUCED TRANSCRIPT PROTEIN, PUTATIVE-RELATED 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01263 Cca-Chr1 22225405 22232415 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01263 - - gmx:100819560 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01282 07 32981801 32985911 Cca01g01263 01 22225405 22232415 PCT