Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01127 ATGGAGAAACCAACCCACGTAGCTCTTGTTTCAAGTCCTGGTTTCACCCACTTGGTCCCAATAACTGAGTTTAGTAAGCGACTTGTGAAGCATCGCCCAAATTTTCATGTGACTTGCACCATTCCCTCGCTTGGGCCACCCTCAGAATCTCCCAAAGCCTACCTTAAAACTCTTCCTTCAAACATACACCCCATCTCACTGCCTCCCATTAACAAAGAACAATTGCCCCAAGGAGTACAGCCTGCAACCCTTATTAAACTCACTATTACTCATTCTCTGCCATCAATTCATGAGGTCCTCAAATCCCGATTCTCCAAAGACCCTTTAACTGCCTTGGTGGTAGATGTTTTTGCGTGTCAAGCCTTGGAATTTGCAAAGGAGTTCAATGCCTTGTCCTATGTTTACTTCCCTACTTCAGCTTTGGTACTGTCACTGATTTTCCACGCTCCAAAATTGGATGAGGAAGTTTCAAGTGAGTACTCAAACCTTACAGAACCTATAAAGTTACCAGGTTGTGTACCAGTCATGGGGGTTGATCTTCCGGATCCAGTCCAAAGTCGATCTAGTGAAGTTTACAAGCAGTTTCTTCAAACTTCCAAAGCAATGGTTGCAGCTGATGGGATTATTATCAACACCTTCTTAGAATTGGAACCAAGTGCTGTAAGAGCGTTGGGAGAGTTTGGAGATGGGAAGATCAAATTATACCCAGTGGGACCCATTACACAAAAAGGGTCAAGCAATGAGGTTGATGAGTCAGATAAGTGTTTGAGATGGTTGGACAAGCAACCACCTTGTTCAGTGTTGTATGTTTCATTTGGAAGTGGTGGAACACTCTCTCAACAACAAATCAATGAGTTAGCTTGTGGTTTGGAATTGAGTTGTCAAAGGTTCTTGTGGGTTTTGAGAGCACCAAGTAATTTAGCTAATTCAGCTTATCTTGAAGCTGCAAAGGATGACCCTTTTCAATTCTTACCAGGCGGGTTTTTGGAAAGGACAAAGGAGAAAGGTTTGGTTGTGCCTTTATGGGCACCTCAGGTTCATGTCCTTAGTCACAATTCCGTTGGTGGATTCCTAACCCATTGTGGTTGGAACTCGACCTTGGAAAGTGTTCAAGAGGGAGTGCCTCTAATAACATGGCCACTCTTTGCAGAGCAGAAGATGAATGCAGTGTTGTTAAACGATGGACTTAAAGTGGCATTAAGGCCAAAATTGAATGATGAAGGCATAGTTGAGAGGGAGGAAATTGCAAAGATGGTAAAGTGTCTGATGGAAGGGGAAGAAGGTAAAGGAATGTACGAAAGAATGAGGAATCTAAAAGATTCTGCTAGTAATGCATTGAAGGATGGTTCTTCTGCACAAACCTTGCTTCAATTGGCTAGTCATTGGGAAAATTTGAGTGGGATTTAG 1407 0.4293 MEKPTHVALVSSPGFTHLVPITEFSKRLVKHRPNFHVTCTIPSLGPPSESPKAYLKTLPSNIHPISLPPINKEQLPQGVQPATLIKLTITHSLPSIHEVLKSRFSKDPLTALVVDVFACQALEFAKEFNALSYVYFPTSALVLSLIFHAPKLDEEVSSEYSNLTEPIKLPGCVPVMGVDLPDPVQSRSSEVYKQFLQTSKAMVAADGIIINTFLELEPSAVRALGEFGDGKIKLYPVGPITQKGSSNEVDESDKCLRWLDKQPPCSVLYVSFGSGGTLSQQQINELACGLELSCQRFLWVLRAPSNLANSAYLEAAKDDPFQFLPGGFLERTKEKGLVVPLWAPQVHVLSHNSVGGFLTHCGWNSTLESVQEGVPLITWPLFAEQKMNAVLLNDGLKVALRPKLNDEGIVEREEIAKMVKCLMEGEEGKGMYERMRNLKDSASNALKDGSSAQTLLQLASHWENLSGI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01127 468 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 392 IPR002213 GO:0008194
Cca07g01127 468 CDD GT1_Gtf-like 6 458 IPR002213 GO:0008194
Cca07g01127 468 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 466 - -
Cca07g01127 468 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 464 - -
Cca07g01127 468 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Cca07g01127 468 Gene3D Glycogen Phosphorylase B; 6 451 - -
Cca07g01127 468 Gene3D Glycogen Phosphorylase B; 253 447 - -
Cca07g01127 468 PANTHER GLYCOSYLTRANSFERASE 1 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01127 Cca-Chr7 27569801 27571426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01127 6 463 Glycosyltransferase AT1G01420 48.052 2.74e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01127 K08237 - gmx:100777345 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01482 01 31476977 31478829 Cca07g01127 07 27569801 27571426 PCT