Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01125 ATGGCGAAAACAACTCACATAGCAGTAGTTTCAATCCCTGCATTCAGCCACCAAGCCTCCATAGTGGAGTTCTGCAAGAGACTCCTGGAACTCCACCGCCACTTCCACGTGACCTGCATCTTCCCCACCATCGACGCACCTctccccgccaccctcactctcctccaatccctccctccgaacatccaccacaccttcctccctcccATCAACAAACAAGACCTCCCCCAACACGCCCCCTCGCCAGTCCAAATCCAGCTCGCTGTCTCCCACTCCATGCCTTCCTTCCGCCACACCTTGCACTCTCTCCTCTCCACCACGCCCCTCGCCGCTCTAATTTCCGACCCCTTCGCCAACGAGTCACTCGAAATAGCCAACGAATTCAACCTCTTATCCTTCGTATACTTCCCTCCCTCAGCCATGACTCTCTCGCTTTTCCTCCACTCGCCAACTCTTCACCACCAAGTTTCCTGCGAATACAGAGACCACAAAGAACCCATTCAGCTTCCAGGCTGTGCCCCAATTCCAGGCCCAGACCTCCCCGAGCATTTCCAGAACCTTATACAAACCGGGTCGAGTAATGAACCGGCGGAGTCAGAGTGCGTGAGGTGGTTGGCGAAGCAGAAGCGTAACTCGGTTTTGTATGTGTCGTTTGGAAGCGGAGGCACACTCTCTGAAGAACAGGTGAATGAGTTAGCTTTTGGGTTGGAGTTGAGTGGTCAGAATTTCTTGTGGGTTTTGAGAGCGCCCAGTGACACGCCAGATGCTGCTTATGTTGCTGCTTCTAATGATGACCCTTTGAGGTTTTTACCAGATGGGTTCCTTGAGAGAACCCAAGGGCGTGGTTTGGTTGTTATTAATTGGGCCCCACAGGCCCAAATCCTTGGTCACGCTTCAACCGGTGGGTTTCTGACCCACTGTGGGTGGAATTCGGCGCTTGAGAGCATTGTGTTGGGAGTGCCGATGATAGCGTGGCCTTTGTTTGCTGAACAGAGAATGAATGCTGTTTTGTTAACCGAGGGCGTTAGAGTGGGCTTGAGGCCCAAATTCAATGAGAATGGGATAGCGGAGAGAGAGGAAATTGCTGAGGTGGTTAAAGGTCTAATGGTGGGTGAAGAAGGAAATGAGATTAGAAGAAGAATTGAAAAGCTCAAAGATGCAGCTGCTGATGCGTTGAAAGAAGATGGGTCCTCCACAAGGGCACTTTACCGGTTTGGCAAACTTTTTGGGACAACCTTA 1239 0.4859 MAKTTHIAVVSIPAFSHQASIVEFCKRLLELHRHFHVTCIFPTIDAPLPATLTLLQSLPPNIHHTFLPPINKQDLPQHAPSPVQIQLAVSHSMPSFRHTLHSLLSTTPLAALISDPFANESLEIANEFNLLSFVYFPPSAMTLSLFLHSPTLHHQVSCEYRDHKEPIQLPGCAPIPGPDLPEHFQNLIQTGSSNEPAESECVRWLAKQKRNSVLYVSFGSGGTLSEEQVNELAFGLELSGQNFLWVLRAPSDTPDAAYVAASNDDPLRFLPDGFLERTQGRGLVVINWAPQAQILGHASTGGFLTHCGWNSALESIVLGVPMIAWPLFAEQRMNAVLLTEGVRVGLRPKFNENGIAEREEIAEVVKGLMVGEEGNEIRRRIEKLKDAAADALKEDGSSTRALYRFGKLFGTTL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01125 413 PANTHER GLYCOSYLTRANSFERASE 187 407 - -
Cca07g01125 413 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 195 338 IPR002213 GO:0008194
Cca07g01125 413 Gene3D Glycogen Phosphorylase B; 6 186 - -
Cca07g01125 413 PANTHER GLYCOSYLTRANSFERASE 187 407 - -
Cca07g01125 413 Gene3D Glycogen Phosphorylase B; 199 393 - -
Cca07g01125 413 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 404 - -
Cca07g01125 413 Coils Coil 374 394 - -
Cca07g01125 413 CDD GT1_Gtf-like 6 391 IPR002213 GO:0008194
Cca07g01125 413 PANTHER GLYCOSYLTRANSFERASE 3 184 - -
Cca07g01125 413 ProSitePatterns UDP-glycosyltransferases signature. 288 331 IPR035595 -
Cca07g01125 413 PANTHER GLYCOSYLTRANSFERASE 3 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01125 Cca-Chr7 27400072 27401460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01125 2 402 Glycosyltransferase AT1G01420 41.703 3.36e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01125 K08237 - gmx:100776809 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01481 01 31392817 31393950 Cca07g01125 07 27400072 27401460 PCT