Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01481 ATGACTCGCTCCATGCCATCTATACACAAGGCCTTGAAATCCTTAACTTTAGAGACCACCCTTGTGGCCATGGTGGTTGATCTTTTGGCCTTTGAAGCACTAGATTTTGCTCAAGAGTACAACATGTTGTCCTACGTTTACTTCCCTTCCTCAGCTACCACACTCTCCACGCACTTGTATTTGCCCAAGTTGGACGAGGAAACATCATGCGAGTATAGGAATCTCATAGATCCTATTGAAGTACCTGGTTGTGTACCATTCCATGGTCGTGATCTCTATACCGTAGCTCAAGATCGGACTGACCCAGTTTACAAAATCTTGCTCCAACGTGTTAAACGAATCCGTTATGTTGATGGGATCTTTGTTAATAGCTTCTTGGAAATGGAAAATGGTCCCATCGAAGCATTGAAAGACGAGGAAAGGGGGTACCCTTGTGTGTATCCCGTTGGACCAATTGTTCAAAGTGGTGATGATGCAAAAGGGTTGGATTTGGAGTGTCTAAAATGGTTGGACAAACAGCAAGTTGGTTCGGTTTTGTATGTTTCTTTTGGTAGTGGTGGAACATTGTCAAAGGAACAAATGAATGAGTTGGCTTGTGGTTTGGAGTTGAGTAATCATAAGTTCTTATGGGTTGTGAGAGCACCAAATGATACAGTCGATGTTGCTTATCTTGGTGCACAAAATGATGTGGATCCGTTGCAATTTTTACCATGTGGGTTTTTGAATAGAACCAAAGAGCAAGGTTTGGTTATTCCTTTATGGGCACCTCAGGTTCAAGTCCTTGGTCACAGATCAGTTGGTGGGTTCTTGACTCACTGTGGTTGGAATTCGACCCTTGAGAGTGTGCTGAATGGTGTGCCACTCATCACATGGCCACTGTTTGCGGAGCAGAGAATGAATGCGATTGTGCTGAGTGAGAGTCTCAAAGTGGGAGTCAGACCAAAAGTTAATGAAAAGGGGTTGGTGGAAAGGGAAGAAATTGTTGAAGTGATCAAGTGTTTAATGGAAGGGGAACAAGGTAGGGAAATGAGAAAAAGAATGAAGGAATTGAAAGAAGCTGCTATTAATGCTATCAAGGAAGATGGATCTTCAACAAAGAATCTTTCTCAGGTAGCACTTAAGTGGAAAAGTTTG 1134 0.4277 MTRSMPSIHKALKSLTLETTLVAMVVDLLAFEALDFAQEYNMLSYVYFPSSATTLSTHLYLPKLDEETSCEYRNLIDPIEVPGCVPFHGRDLYTVAQDRTDPVYKILLQRVKRIRYVDGIFVNSFLEMENGPIEALKDEERGYPCVYPVGPIVQSGDDAKGLDLECLKWLDKQQVGSVLYVSFGSGGTLSKEQMNELACGLELSNHKFLWVVRAPNDTVDVAYLGAQNDVDPLQFLPCGFLNRTKEQGLVIPLWAPQVQVLGHRSVGGFLTHCGWNSTLESVLNGVPLITWPLFAEQRMNAIVLSESLKVGVRPKVNEKGLVEREEIVEVIKCLMEGEQGREMRKRMKELKEAAINAIKEDGSSTKNLSQVALKWKSL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01481 378 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 176 337 IPR002213 GO:0008194
Cca01g01481 378 Gene3D Glycogen Phosphorylase B; 163 359 - -
Cca01g01481 378 Gene3D Glycogen Phosphorylase B; 2 365 - -
Cca01g01481 378 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 377 - -
Cca01g01481 378 ProSitePatterns UDP-glycosyltransferases signature. 254 297 IPR035595 -
Cca01g01481 378 PANTHER GLYCOSYLTRANSFERASE 1 377 - -
Cca01g01481 378 CDD GT1_Gtf-like 23 354 IPR002213 GO:0008194
Cca01g01481 378 Coils Coil 340 360 - -
Cca01g01481 378 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01481 Cca-Chr1 31392817 31393950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01481 1 377 Glycosyltransferase AT1G01420 50.263 2.63e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01481 K08237 - gmx:100779176 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01481 01 31392817 31393950 Cca07g01125 07 27400072 27401460 PCT