Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01122 ATGGAGAAACCTCACATAGCAGTAGTTCCCAGTGCGGGCTTCACCCATCTGGTCCCAATTCTCGAGTTCTCCAAACGACTTCTTCATCTCCACCCAGAATTTCACATCACATGCTTCATTCCCTCAGTTGGATCAACCCCACCTTCCTCCAAAGCTTACCTTCAAAGCCTTCCACCAACCATAACTTCCATTTTCCTTCCCCCCATAACCCTTGACCATTTGCCAGATACCACTACCCTTGCACTCCAAATTGAATCCTCGGTGGATCTCTCTCTACCCCACATAAGGCATGAATTGAAGTCCCTATGTTCAAGAGCCAAGGTTGTAGCTTTGGTTGTGGATGTTTTTGCAAATGGAGCATTGGAGATAGGTAGGGAACTCAACCTCTTTTCTTACATGTACCTCCCACAATCTGCTATGTTGCTTTCTTTGTACTTCTACTCATCAAAACTAGATGAGATACTTTTTTCTGAGTCTAGGGACCCACAAGAGCCTATAAAGATTCCTGGTTGTGTTCCTATTCCTAGCAGAGATCTCCCTATCCCTTTTCAACATCTATCTAGCATAGGTTACAAGGGGTTTCTTGAGCGTGCCAAAAGATTTGATGTTGCTGATGGTATCTTTATGAATACCTTCTTAGAATTGGAATCAGAGGCAATAAGAACTTTGCAAGAAGAGGACAAAGGGAAGCCTAAGGTGTATCCTGTTGGACCCATTATTCAGATGGGGTCAATTGGTCATGAAGATGGGGTGGCGTGTTTAACATGGTTGGATAAGCAAGAACCAAAATCTGTTTTGTATGTGTCCTTTGGAAGTGGTGGCACACTTTCTCAAGACCAAGTCAATGAACTAGCCTTTGGGTTGGAAATGAGTGGTCAAAAATTTCTTTGGGTTATGAGAGCCCCTAGCAGTGTGGCAAGTTCTGCTTACCTTGGTGCTGAAGCTAATGATCCTCTAAACTTTTTGCCCCATGGTTTCTTGGAGAGAACCAAGAAGCAAGGGTTGGTTGTGCCTAATTGGGCCCCTCAGATTGAAGTTCTTGGTCATGGTTCAACTGGGGGGTTCGTATCTCACTGTGGTTGGAACTCGGTGCTTGAAAGTGTTGTGAAGGGTGTGCCAGTGATAGCATGGCCACTCTTTGCTGAGCAGAGCCTTAATGCAGTGATGCTAACTGATGATGTGAAAGTGGCACTAAGACCAAAAGTTAATGAAAGTGGATTGGTTGAAAGAGAAGAAATTGCTAGAGTTGTAAGAGGGTTGATGGAAGATAATGAAGGCATGGAGATTCGGAAGAGAATGGAACAATTGAAGATTGCTGCTTCTAATGCAATAAAAGAAGATGGTTCATCTACAAAGACTCTGTTAGAGTGGCCACGAGTTTAA 1383 0.4382 MEKPHIAVVPSAGFTHLVPILEFSKRLLHLHPEFHITCFIPSVGSTPPSSKAYLQSLPPTITSIFLPPITLDHLPDTTTLALQIESSVDLSLPHIRHELKSLCSRAKVVALVVDVFANGALEIGRELNLFSYMYLPQSAMLLSLYFYSSKLDEILFSESRDPQEPIKIPGCVPIPSRDLPIPFQHLSSIGYKGFLERAKRFDVADGIFMNTFLELESEAIRTLQEEDKGKPKVYPVGPIIQMGSIGHEDGVACLTWLDKQEPKSVLYVSFGSGGTLSQDQVNELAFGLEMSGQKFLWVMRAPSSVASSAYLGAEANDPLNFLPHGFLERTKKQGLVVPNWAPQIEVLGHGSTGGFVSHCGWNSVLESVVKGVPVIAWPLFAEQSLNAVMLTDDVKVALRPKVNESGLVEREEIARVVRGLMEDNEGMEIRKRMEQLKIAASNAIKEDGSSTKTLLEWPRV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01122 460 Gene3D Glycogen Phosphorylase B; 248 445 - -
Cca07g01122 460 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Cca07g01122 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 457 - -
Cca07g01122 460 CDD GT1_Gtf-like 4 441 IPR002213 GO:0008194
Cca07g01122 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 262 391 IPR002213 GO:0008194
Cca07g01122 460 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 455 - -
Cca07g01122 460 PANTHER GLYCOSYLTRANSFERASE 1 455 - -
Cca07g01122 460 Gene3D Glycogen Phosphorylase B; 5 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01122 Cca-Chr7 27334804 27336389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01122 4 456 Glycosyltransferase AT1G01420 47.277 1.44e-144 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01122 K08237 - gmx:100776196 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01480 01 31378584 31380405 Cca07g01122 07 27334804 27336389 PCT