Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01120 ATGGAGAAACCTCACATAGCAGTAGTTCCCAGTGCGGGCTTCACCCATCTGGTCCCAATTCTCGAGTTCTCCAAACGACTTCTTCATCTCCACCCAGAATTTCACATCACATGCTTCATTCCCTCAGTTGGATCAACCCCACCTTCCTCCAAAGCTTACCTTCAAAGCCTTCCACCAACCATAACTTCCATTTTCCTTCCCCCCATAACCCTTGACCATTTGCCAGATACCACTACCCTTGCACTCCAAATTGAATCCTCGGTGGATCTCTCTCTACCCCACATAAGGCATGAATTGAAGTCCCTATGTTCAAGAGCCAAGGTTGTAGCTTTGGTTGTGGATGTTTTTGCAAATGGAGCATTGGAGATAGGTAGGGAACTCAACCTCTTTTCTTACATGTACCTCCCACAATCTGCTATGATGCTTTCTTTGTACTTCTACACATCAAAACTAGATGAGATACTTTTTTCTGAGTCTAGAGACCCACAAGAGCCTATAAAGATTCCTGGTTGTGTTCCTATTCCTAGCAGAGATCTCCCTATCACTTTTCAACATCTATCTAGCATAGGTTACAAGGGGTTTCTTGAGCGTGCCAAAAGATTTGATGTTGCTGATGGTATCTTTATGAATACCTTCTTAGAATTGGAATCAGAGGCAATAAGAACTTTGCAAGAAGAGGACAAAGGGAAGCCTAAGGTGTATCCTGTTGGACCCATTATTCAGATGGGGTCAATTGGTCATGAAGATGGGGTGGCGTGTTTAACATGGTTGGATAAGCAAGAACCAAAATCTGTTTTGTATGTGTCCTTTGGAAGTGGTGGCACACTTTCTCAAGACCAAGTCAATGAACTAGCCTTTGGGTTGGAAATGAGTGGTCAAAAATTTCTTTGGGTTATGAGAGCCCCTAGCAGTGTGGCAAGTTCTGCTTACCTTGGTGCTGAAGCTAATGATCCTCTAAACTTTTTGCCCCATGGTTTCTTGGAGAGAACCAAGAAGCAAGGGTTGGTTGTGCCTAATTGGGCCCCTCAGATTGAAGTTCTTGGTCATGGTTCAACTGGGGGGTTCGTATCTCACTGTGGTTGGAACTCGGTGCTTGAAAGTGTTGTGAAGGGGGTGCCAGTGATAGCATGGCCACTCTTTGCTGAGCAGAGCCTTAATGCAGTGATGCTAACTGATGATGTGAATGTGGCACTAAGACCAAAAGTTAATGAAAGTGGATTGGTTGAAAGAGAAGAAATTGCTAGAGTTGTAAGAGGGTTGATGGAAGATAATGAAGGCATGGAGATTCGGAAGAGAATGGAACAATTGAAGATTGCTGCTTCTAATGCAATAAAAGAAGATGGTTCATCTACAAAGACTCTGTCAGAGGTGGCCACGAGTTTAAGAGGCTTCAATCTTCAAATTTAG 1407 0.4371 MEKPHIAVVPSAGFTHLVPILEFSKRLLHLHPEFHITCFIPSVGSTPPSSKAYLQSLPPTITSIFLPPITLDHLPDTTTLALQIESSVDLSLPHIRHELKSLCSRAKVVALVVDVFANGALEIGRELNLFSYMYLPQSAMMLSLYFYTSKLDEILFSESRDPQEPIKIPGCVPIPSRDLPITFQHLSSIGYKGFLERAKRFDVADGIFMNTFLELESEAIRTLQEEDKGKPKVYPVGPIIQMGSIGHEDGVACLTWLDKQEPKSVLYVSFGSGGTLSQDQVNELAFGLEMSGQKFLWVMRAPSSVASSAYLGAEANDPLNFLPHGFLERTKKQGLVVPNWAPQIEVLGHGSTGGFVSHCGWNSVLESVVKGVPVIAWPLFAEQSLNAVMLTDDVNVALRPKVNESGLVEREEIARVVRGLMEDNEGMEIRKRMEQLKIAASNAIKEDGSSTKTLSEVATSLRGFNLQI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01120 468 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 262 391 IPR002213 GO:0008194
Cca07g01120 468 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Cca07g01120 468 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 464 - -
Cca07g01120 468 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Cca07g01120 468 CDD GT1_Gtf-like 4 441 IPR002213 GO:0008194
Cca07g01120 468 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 457 - -
Cca07g01120 468 Gene3D Glycogen Phosphorylase B; 5 450 - -
Cca07g01120 468 Gene3D Glycogen Phosphorylase B; 248 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01120 Cca-Chr7 27282892 27284759 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01120 4 468 Glycosyltransferase AT1G01420 46.285 8.44e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01120 K08237 - gmx:100776196 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01479 01 31359404 31361049 Cca07g01120 07 27282892 27284759 PCT