Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00209 ATGGCACATCAGCGGCGGCGCCACCATTATTACCAACGCTTCCGTCTGATGATTCCGGTCATTTCCGCCGTCGGCGCCGCGCTGCTTTTTCTCTTCGCTCTCCTTTCGTTTTTAGCTCCTTCTCCCGTCGAAACCGATCGTATGCACCGGAGACGCCAGCCAACTTCGATTAACATTCACGCGGATGAGGCGATTGGAAATCATCATCCTGTGTTTCGCGTTCCGAGTGACGGAGGAAAGTTGGGACGTGATATCTGGAGCTCTCGAAATTCAGAGCACTTCTTCGGCTGTAGCAATTCCAGCAGCAAGTTTCAAAACGCTCAAGCGATTACACAATCGAATCGATACTTGTTGATTGCAACAAGTGGAGGCTTGAATCAACAAAGAACTGGGATTACAGATGCTGTTGTTGCTGCACGAATTTTGAATGCTACTCTTGTTGTTCCAAAATTGGATCAACGATCTTTCTGGAAAGATTCTAGCAACTTTTCAGAGATCTTTGATACTGATTGGTTTATATCATATCTGTCAAAAGATGTCAAAATTATCAAGCAACTCCCCAGTAAGGGTAGGAAAGCATTATCTGCATATAATATGCGAGTTCCAAGGAAGTGTAATGAAAGGTGTTATATAAATCGCATATTACCTGTACTCGTTAAAAAGCATGCTGTTCAGCTGAGCAAATTTGACTACAGGCTTGCAAACAGGTTGGATACGGATTATCAGAAGTTGAGATGTAGAGTTAATTACCATGCCTTAAGATTTACCAACCCAATACTTGCAATGGGTGAGAAATTGGTCCATCGTATGAGGATGAGAAGCAATCATTATATTGCACTGCACCTAAGATTTGAACCTGATATGCTTGCGTTTTCTGGATGTGATTACGGTGGAGGGGAGAAGGAGCAGAAGGAATTGAGTGCAATAAGGAGGAGGTGGAAGACATTACATAGAAGCAATCCTGATAGGGCAAGGAGGCAGGGAAGATGCCCATTAACCCCCGAAGAAGTTGGTCTCATGCTAAGAGCATTGGGATATGGTTCTGATGTTCATATTTATGTTGCATCAGGGGAAGTATATGGAGGGGAAAGAACATTGGCACCTCTAAAAGCATTATTCCCTAATTTCCATTCAAAAGAGACCATTACTACTAAGGAAGAGTTGGAACCATTTTCTTCATTTTCTTCTCGCATGGCTGCACTTGACTTCATTGTCTGTGATGAAAGTGATGTATTTGTAACGAATAATAATGGAAATATGGCAAAAATATTAGCCGGGCGAAGGAGATACTTTGGGCATAAACCAACCATTCGTCCAAATGCTAAAAAACTCTATCGATTATTCTTGAATAGAAGTAATTCAACTTGGGAAGTTTTTGCTTCTAGTGTCCGTAATTTCCAGAGAGGTTTCATGGGGGAGCCAAAGGAGGTTAGACCAGGTAGAGGCGGGTTTCATGAGAATCCATCGACCTGCATATGTGAAGATTCTGCAGCCAAAGTCGACAAAAATTCAGGACCTAGAAAATATGGGAAGGATAATTCAACGAAGAAAAATGTGGCAAATGATGAACCGGTTGTTGACAATGAGTCTGAATGGCCAGACATGGATGAGGATGATGAACAGAATGATTTGACAGAGAAGGGTGCGTTCAATGAAACAACTGCAGACTACGAAGCTCTGAACTTTGAGGATCCTGATTTGGAGGAATTTATATCAGATTAG 1722 0.4233 MAHQRRRHHYYQRFRLMIPVISAVGAALLFLFALLSFLAPSPVETDRMHRRRQPTSINIHADEAIGNHHPVFRVPSDGGKLGRDIWSSRNSEHFFGCSNSSSKFQNAQAITQSNRYLLIATSGGLNQQRTGITDAVVAARILNATLVVPKLDQRSFWKDSSNFSEIFDTDWFISYLSKDVKIIKQLPSKGRKALSAYNMRVPRKCNERCYINRILPVLVKKHAVQLSKFDYRLANRLDTDYQKLRCRVNYHALRFTNPILAMGEKLVHRMRMRSNHYIALHLRFEPDMLAFSGCDYGGGEKEQKELSAIRRRWKTLHRSNPDRARRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYGGERTLAPLKALFPNFHSKETITTKEELEPFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLYRLFLNRSNSTWEVFASSVRNFQRGFMGEPKEVRPGRGGFHENPSTCICEDSAAKVDKNSGPRKYGKDNSTKKNVANDEPVVDNESEWPDMDEDDEQNDLTEKGAFNETTADYEALNFEDPDLEEFISD 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00209 573 CDD O-FucT_plant 116 436 IPR024709 -
Cca07g00209 573 MobiDBLite consensus disorder prediction 501 524 - -
Cca07g00209 573 MobiDBLite consensus disorder prediction 501 573 - -
Cca07g00209 573 PANTHER O-FUCOSYLTRANSFERASE 16 5 573 - -
Cca07g00209 573 MobiDBLite consensus disorder prediction 527 543 - -
Cca07g00209 573 Pfam GDP-fucose protein O-fucosyltransferase 116 430 IPR019378 -
Cca07g00209 573 MobiDBLite consensus disorder prediction 559 573 - -
Cca07g00209 573 PIRSF UCP009360 1 501 IPR024709 -
Cca07g00209 573 PANTHER O-FUCOSYLTRANSFERASE 16 5 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00209 Cca-Chr7 2669740 2677423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00209 85 499 Miscellaneous Gene Families AT1G22460 43.021 1.80e-102 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00209 - - gmx:100817698 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00209 07 2669740 2677423 Cca06g01165 06 26038404 26048348 ECH
Cca07g00209 07 2669740 2677423 Cca07g00209 07 2669740 2677423 ECH