Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00090 ATGGCCTCTGCTTCTGCTACTCTTCTCAAGTCTTCTCCTGTTCTCGACAAGTGCGAGTGGGTCAAGGGTCAAACCCTTCGCCAACCTTCACTCTCTCTTGTCCGATGCAACCCCGCCTCAGCCTCAGCCCTCACCGTCAGAGCCGCTTCCTATGCTGACGAGCTCGTCAAAACCGCCAAAACAGTGgcctcaccggggcgtggtattttggccatggacgagtctaatgccacgtgtgggaagcgtttggcgtcaattggactagagaacactgaagctaaccgccaggcataccgtaccctgcttgtcacagtacccggtcttggtgagtatatctctggtgccattctctttgaggaaactctctaccaATCCACTGTTGATGGAAGGAAGATCGTCGACGTACTTCATGAGCAGAAGATTGTTCCTGGTATTAAGGTCGATAAGGGTTTGGTGCCTCTAGCTGGTTCGAACGATGAGTCATGGTGCCAAGGACTGGATGGTCTTGCGTCTCGTTCAGCTGCATACTACCAGCAAGGTGCCCGTTTTGCGAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCAGTGAAGGAAGCTGCCTGGGGTTTAGCTCGCTATGCGGCCATTTCTCAGGACAACGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAGCATGGGATTGACAGGACATTCGAAGTGGCTCAAAAGGTGTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTGTTTGAGGGTATTCTCCTGAAGCCTAGCATGGTTACCCCAGGAGCTGAGTCCAAAGACAAGGCCACTCCTCAGCAAGTTGCTGACTACACCCTCAAGCTCCTTCACAGGAGAATCCCACCTGCTGTCCCTGGAATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCTTGAACTTGAATGCCATGAACCAGGGTCCAAACCCATGGCACGTGTCCTTCTCCTACGCCAGAGCCCTCCAAAACACGTGCTTGAAGACATGGGGTGGACGCCCTGAGAATGTAAAGGCAGCACAAGATGCTCTTCTTTTCCGTGCCAAGTCCAACTCTCTCGCTCAGCTTGGAAAGTACACTGCAGAGGGTGAATCCGAGGAAGCCACAAAGGGAATGTTTGTCAAAGGCTACTCCTACTAA 1197 0.4403 MASASATLLKSSPVLDKCEWVKGQTLRQPSLSLVRCNPASASALTVRAASYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGEYISGAILFEETLYQSTVDGRKIVDVLHEQKIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDKATPQQVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTAEGESEEATKGMFVKGYSY 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00090 398 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 259 269 IPR029768 -
Cca07g00090 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 398 - -
Cca07g00090 398 SUPERFAMILY Aldolase 45 398 - -
Cca07g00090 398 Pfam Fructose-bisphosphate aldolase class-I 54 398 IPR000741 GO:0004332|GO:0006096
Cca07g00090 398 Gene3D Aldolase class I 34 397 IPR013785 -
Cca07g00090 398 CDD FBP_aldolase_I_a 52 378 - -
Cca07g00090 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 398 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00090 Cca-Chr7 1202524 1204869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00090 44 398 Miscellaneous Gene Families AT3G52930 54.039 1.00e-132 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00090 K01623 - gmx:100798677 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00090 07 1202524 1204869 Cca07g00090 07 1202524 1204869 ECH
Cca04g00373 04 3781375 3784634 Cca07g00090 07 1202524 1204869 ECH