Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02035 atgacaagacccctgagaagcaaCACGGCAGGAACCAATGGCAGCAATGCCGCTGGTTTCTTAACCGGGAACCCCAGCAGATGTGAAAACCCTCCTGCTGGAGGATCCACCCTTGAAGAAGTTTTGGCCGCAATGGAAACCTTACGAAGGGAGAACCAAGAAGTGCGTCGAAGGGCAGAAGAAGCTGAGCGTTTGTACCAACGAAACCACACGGAGACCAGTAACAACCCGACGTTACAAGAGATCCTGGCCACAGTGGAGACGCTGAGGCGGGAAAATGAAGAGGCGCGGCAGCGAGCAGAAGAAGCAGAACGCCTACGCCAGCACCACATCGAAACATTGAATAATGATCCAGCGATAAGGGAGATCAAGATCACGGTAGAAGCTCTGAGACGTGAGAACGAAGAGGCGCGGAGGAGAGTGGAGGAATCCGAGCGTCTACGTCAGGAAGATCACGAGCGTATGCGTCACCTCAATGAGGACCATCAAAGAAGAGCCGAGGCAGCGCAAGCGGCATTACAAGCCCAAATTGCAGAGCTACGAAGAGGCAACACTGAAGGAGGaggaccagaaccgtcaagagggggaCTGAACTACAATGCTTCTTCGCATGCAAGTTCGCAGTTTATAGGTGAAGGAGATGACGGGTTCTGTGATGACAAGAAAGGCAAAAAAGAAGAGGCTGAGGAAGAGGACTTGTCCATGGTTTCTGATGCCTCTTCTGGGCCTCCACACTTGCCAGATGCACAAGATAATGGCAGTCTTTACTCAGCATCTAAGGTAGCAATGGCAAACCTTGGCAATAAGAGGAGTAAAAAGAGGCAGAAAGTTAAGGAAAACCAACACCTTCCTTCTTTTCTTGATGACACTGCTAGCTCTCCTTTCTTTGACTTCTCCATGAACAATGTCACTTTGACCAACCAACAAACTTCGACAGAGAGCATGCTAGATTACTCACAAGGTTTCTCTGCTACTTATTATGAGGAGAGATCCTCGTTGCAAGACCACTTAGGTTTTTTACAACCATCCCTATCAGAAAATGGAGTTCATAACAACAAATGGTACGGAGGGAAAGAGATGGGAATGATATAA 1092 0.4643 MTRPLRSNTAGTNGSNAAGFLTGNPSRCENPPAGGSTLEEVLAAMETLRRENQEVRRRAEEAERLYQRNHTETSNNPTLQEILATVETLRRENEEARQRAEEAERLRQHHIETLNNDPAIREIKITVEALRRENEEARRRVEESERLRQEDHERMRHLNEDHQRRAEAAQAALQAQIAELRRGNTEGGGPEPSRGGLNYNASSHASSQFIGEGDDGFCDDKKGKKEEAEEEDLSMVSDASSGPPHLPDAQDNGSLYSASKVAMANLGNKRSKKRQKVKENQHLPSFLDDTASSPFFDFSMNNVTLTNQQTSTESMLDYSQGFSATYYEERSSLQDHLGFLQPSLSENGVHNNKWYGGKEMGMI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02035 363 MobiDBLite consensus disorder prediction 134 156 - -
Cca06g02035 363 MobiDBLite consensus disorder prediction 1 35 - -
Cca06g02035 363 MobiDBLite consensus disorder prediction 51 76 - -
Cca06g02035 363 Coils Coil 79 113 - -
Cca06g02035 363 Coils Coil 38 72 - -
Cca06g02035 363 MobiDBLite consensus disorder prediction 1 23 - -
Cca06g02035 363 PANTHER OSJNBA0091C07.3 PROTEIN 206 352 IPR044670 GO:0009690|GO:0009691
Cca06g02035 363 MobiDBLite consensus disorder prediction 266 286 - -
Cca06g02035 363 MobiDBLite consensus disorder prediction 183 253 - -
Cca06g02035 363 PANTHER - 206 352 - -
Cca06g02035 363 Coils Coil 120 179 - -
Cca06g02035 363 MobiDBLite consensus disorder prediction 51 68 - -
Cca06g02035 363 MobiDBLite consensus disorder prediction 214 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02035 Cca-Chr6 35604989 35611013 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02035 - - ccaj:109814597 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02035 06 35604989 35611013 Cca06g02035 06 35604989 35611013 ECH
Cca06g02035 06 35604989 35611013 Cca02g02480 02 45927239 45928568 PCT