Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02480 ATGAATACATTTGGTTCAGAATGCAGTAGTGGGTGTGAGTCTGGTTGGACTCTTTACCTGGAGCGCTCTTTCCTCAACCAGAATGCTTCTTCACATAGAGGTGCCACTGAGGAGGAACACAAAGACAAAAGGTTCAAACATGAGGACTCAGGGGAGGAGGATTTGTCCATGCTTTCTGATGCTTCTTCTGGACCTCCGCATTTCCCACACTATGAGGCTTACTTCAATGAAGAGGTCAATGGTAGCTTTTATTCAGCTTCCAAGGCAGTGAAGCTGGCCAAGAATGGTACAAAGAAGCAGAAAGTTAAAGAAAATCAACATCTTCCTTCTATTCTTCATGACACTGCTAGCTCTCCTTTTTTTGACTTTTCAACTAACAATATTACTGGGGGCAAGCAACAAACTTCCACAGGGAGTGTGCTAGATTATTCACAAGGCTTCTCTGCAACTTATTTTGAGGGAGGATCCTCATTCCAAGAACAACACTTTGGTTTCTTACAATCAGAAAATGAGCTTGAAGGCAACAACAGATGGTATGGAGGGAAAGGGATGGGAATAAGGTAA 564 0.4291 MNTFGSECSSGCESGWTLYLERSFLNQNASSHRGATEEEHKDKRFKHEDSGEEDLSMLSDASSGPPHFPHYEAYFNEEVNGSFYSASKAVKLAKNGTKKQKVKENQHLPSILHDTASSPFFDFSTNNITGGKQQTSTGSVLDYSQGFSATYFEGGSSFQEQHFGFLQSENELEGNNRWYGGKGMGIR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02480 187 MobiDBLite consensus disorder prediction 28 62 - -
Cca02g02480 187 PANTHER - 1 170 - -
Cca02g02480 187 MobiDBLite consensus disorder prediction 33 54 - -
Cca02g02480 187 PANTHER OSJNBA0091C07.3 PROTEIN 1 170 IPR044670 GO:0009690|GO:0009691
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02480 Cca-Chr2 45927239 45928568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02480 - - pvu:PHAVU_007G046700g 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02480 02 45927239 45928568 Cca02g02480 02 45927239 45928568 ECH
Cca06g02035 06 35604989 35611013 Cca02g02480 02 45927239 45928568 PCT