Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01826 ATGGAAGCTTTCACTTTGCTCAAATACTGGAGAGGAGCCGGAGCTCTCGGACTCCCACCTTCCTCCGACAATCCCGCTTCACGCGccgccgccaccaccaccaccaccaccaccatcctcaccgccgtcgacaacgaaaccgacgacgaaaacgacgacTTCTTCGACCTAGAGTTCACAGTACCCGAGGATTCGGAAAACGCCAGCCGAAGCGAAGAGCaagaagaagaagaagaagaagaagaagaggaagaagaagaaTTTAAGTTGACGCTTTCCCCTTCGAGCAACGATCCGAACCTCTCGGAAGCTAACTCGAAGCCTCAGTTCACGGCCTCCCTCTTGAAATCGGCGACCAAGTTCCGCGTGTTCATGTTGGGCCTGAAGAAGCCGAAGCCCAGCGAGGCGGAGGCCCAGAAAGAGAAGAAGCTGTTCACAGTGAAATTCAAAGTGGAGGAAGTCCCCATCGTCTCCCTCTTCAGCTCCAAACCCAACAAAACACACAAACACGCCTCCGAGGACCCACCTTCCGAAGACAAACAACGCTTCTCCAAGGAAGTAATGCAAAAGTACTTCAAAATCGTCAAGCCTCTCTACATCAGAGTCTCGCGCCGCTACGCCGATAAACTCAACTTAGCCTCCGCCGGAAAACCACCCACGCCCCAACCCCAACCTCAACCCGCCGTCAAGAACATCAACACTGCTCAAAAACTGCCCGCCGGACTTAGCGTTGTGTGCAAGCATCTGGGGAAAAGCCGCTcggcgtcctcggcggcggtggcggctgctcctgcggcggcgccggcggTGTCTTCCAAACGACGCGATGATTCGCTGTTGCAGCAACAGGATGGGATTCAAGGCGCCATCTTACACTGCAAGAGATCCTTCAATGCCTCCAGAGCTGAGTGCGAATCTTCCCAGCTACCGCGTTGTGTGAGCCAGAGCCATCCATCCATGAATGAACAGCGCCTTTCAACATAG 984 0.4472 MEAFTLLKYWRGAGALGLPPSSDNPASRAAATTTTTTTILTAVDNETDDENDDFFDLEFTVPEDSENASRSEEQEEEEEEEEEEEEEFKLTLSPSSNDPNLSEANSKPQFTASLLKSATKFRVFMLGLKKPKPSEAEAQKEKKLFTVKFKVEEVPIVSLFSSKPNKTHKHASEDPPSEDKQRFSKEVMQKYFKIVKPLYIRVSRRYADKLNLASAGKPPTPQPQPQPAVKNINTAQKLPAGLSVVCKHLGKSRSASSAAVAAAPAAAPAVSSKRRDDSLLQQQDGIQGAILHCKRSFNASRAECESSQLPRCVSQSHPSMNEQRLST 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01826 327 MobiDBLite consensus disorder prediction 60 108 - -
Cca06g01826 327 MobiDBLite consensus disorder prediction 166 183 - -
Cca06g01826 327 MobiDBLite consensus disorder prediction 258 278 - -
Cca06g01826 327 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 321 - -
Cca06g01826 327 MobiDBLite consensus disorder prediction 162 183 - -
Cca06g01826 327 MobiDBLite consensus disorder prediction 92 108 - -
Cca06g01826 327 MobiDBLite consensus disorder prediction 69 88 - -
Cca06g01826 327 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 321 IPR039619 GO:0005886
Cca06g01826 327 Coils Coil 65 91 - -
Cca06g01826 327 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01826 Cca-Chr6 33682257 33684055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01826 - - gmx:100807473 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01826 06 33682257 33684055 Cca06g01826 06 33682257 33684055 ECH
Cca02g02204 02 42549121 42550011 Cca06g01826 06 33682257 33684055 ECH
Cca06g01826 06 33682257 33684055 Cca09g02474 09 50250518 50251424 PCT