Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02204 ATGGACGCTCTGAACTTCCTCAAGTTCTGGAGACACGCCACCATGACCACTTCCTCCGAACCTCATCTGGTCGTCGAAACCGACACTGAATCAGACGAAGACGACTCATTCTTCGACTTGGAGCTCACGCTACCcgacttcgacaactccaaagaaacgacaacaacaacaacaaccgaacccaaagacaacgaTGTTATGCCTAAGCCTAAGACAACACTTCCTCTGTCTCCTCCCGAGCCTATCTCCAAACGAAAGATCCTCCCAATCGAGCCTATCTCCAAGCCTCAATCTCCCATTGCGCTTCTCAGGTCCGCGCCCAGCTTCAGAATCTTCATGTTCAGAAAGCGGAACAGAATGCCTCAACAGAAAACAGAACACGAACCCAAGAAGGAAGCTAAAGTCTTCGCGGTGAAACTCCACGTTGACGATTTCCGTTCCTCCCCCGCGCTCAGCAGAGACAACAGCACCAGAAGCTTCGGGAGCAAGGTTCGGAGTTGCAGCCACGAGGAGCCGAAACCGGAGCGGTTCTCCAAGGAGGTGCTGCGGAAGTACCTGAAGCTGATTAAGCCTCTGTATGTTAAAGTCTCGAAGCAGGGGGAGGGGATGAGGGTGGTTTCGAAGCATTTGGGGAAGAGTAGGTCGGCGTCGTCGGCGGTGGGCGGAGTTGGTTCTCCGGCGAATAGGAGCGATGATACGCTGGCGCAGCAGCATGATGGGATTCAAAGCGCCATTCTTCACTGCAAGAGGTCCTTCAACTCCAGAGAAGGATCGATGTATTCGGTGAGAAGGTCTTTCGAGGGGGCAAAAGTGTAA 816 0.4963 MDALNFLKFWRHATMTTSSEPHLVVETDTESDEDDSFFDLELTLPDFDNSKETTTTTTTEPKDNDVMPKPKTTLPLSPPEPISKRKILPIEPISKPQSPIALLRSAPSFRIFMFRKRNRMPQQKTEHEPKKEAKVFAVKLHVDDFRSSPALSRDNSTRSFGSKVRSCSHEEPKPERFSKEVLRKYLKLIKPLYVKVSKQGEGMRVVSKHLGKSRSASSAVGGVGSPANRSDDTLAQQHDGIQSAILHCKRSFNSREGSMYSVRRSFEGAKV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02204 271 MobiDBLite consensus disorder prediction 149 163 - -
Cca02g02204 271 MobiDBLite consensus disorder prediction 47 83 - -
Cca02g02204 271 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 5-RELATED 1 199 - -
Cca02g02204 271 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 5-RELATED 199 261 - -
Cca02g02204 271 MobiDBLite consensus disorder prediction 47 63 - -
Cca02g02204 271 MobiDBLite consensus disorder prediction 215 238 - -
Cca02g02204 271 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 199 IPR039619 GO:0005886
Cca02g02204 271 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 199 261 IPR039619 GO:0005886
Cca02g02204 271 MobiDBLite consensus disorder prediction 149 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02204 Cca-Chr2 42549121 42550011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02204 - - ccaj:109793616 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02204 02 42549121 42550011 Cca06g01826 06 33682257 33684055 ECH
Cca02g02204 02 42549121 42550011 Cca02g02204 02 42549121 42550011 ECH