Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01732 ATGGGTGGAATCGTGTCTACTCCTCCGACCAACAAGTTTCCGTTGCCGACCATGGCAACTGCTAGCGACTATGTTTGGCCATCGAAACTTCTCGTAAATGTTAGTGTCGAGAACAGCTTGGGCGCAATACAGGTGCTGATGTCGCCGGAAGACACTGTCGCCGACTTGGTAAAGGCAGCATTGCTAATTTATCACAAGGAGAAAAGGAGGCCTCTCTTGAAAGACAATGATCCAAAATGCTACCACCTTCACTATTCTCCCTACACCCTCCAAAGTTTGAAGCCAAATGAGAAGCTGAAGAACTTGGGGTCAAGGAATTTCTTTATCTGCTTGAAGCCTCCCGCATCTATTTTCCTAGAAAAAAGGGGGTGTGGTCTGTGGTGTTGCGTGAAGGGCGAAGAGCAGAAATATAGCAAGGGAGGCGAAGCGGACACACTGCGCACGTTAGCACGTGCGCAGTGTGCAGGGAGGAAGAAGGAGATAATGGCCGATCTCTTCGTGTGGCTCATCTCCTTCTTCCTCCTTATCGCCCTGCTTGTGCTCATCACGTTCCAGCTAATGTGCCTCGCAGACCTAGAATTTGATTATATAAATCCCTATGACTCTTCCACGCGAATAAATAGGGTCGTTATGCCTGAATTTATTACGCAAGCTGTCCTATGTTTCTTCTACCTTGTTACCAGGCATTGGATCATGGCTCTCTTCTGTGTTCCTTATCTCCTTTTCAATATCCGATTGTATCGACGAAGAATGCATTTGATTGATGTTACTGAGATATTCAATTTGCTCTCTTGGGAAAAGAAGCAGCGGCTTATCAAACTCTTCTATCTTGTTTTTATCCTTTTCCTCTCTGTATTTTGGATGATTTACACATCATTGGGGGGGGAAAAGTTCAAGGGAGAGATTGTCTTTTGA 915 0.4557 MGGIVSTPPTNKFPLPTMATASDYVWPSKLLVNVSVENSLGAIQVLMSPEDTVADLVKAALLIYHKEKRRPLLKDNDPKCYHLHYSPYTLQSLKPNEKLKNLGSRNFFICLKPPASIFLEKRGCGLWCCVKGEEQKYSKGGEADTLRTLARAQCAGRKKEIMADLFVWLISFFLLIALLVLITFQLMCLADLEFDYINPYDSSTRINRVVMPEFITQAVLCFFYLVTRHWIMALFCVPYLLFNIRLYRRRMHLIDVTEIFNLLSWEKKQRLIKLFYLVFILFLSVFWMIYTSLGGEKFKGEIVF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01732 304 Pfam Cornichon protein 166 286 IPR003377 GO:0016192
Cca06g01732 304 PANTHER CORNICHON FAMILY PROTEIN 162 294 - -
Cca06g01732 304 PANTHER CORNICHON-RELATED 162 294 - -
Cca06g01732 304 SMART Cornichon_2 165 286 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01732 Cca-Chr6 32618645 32623043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01732 K20368 - ccaj:109801475 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01732 06 32618645 32623043 Cca06g01732 06 32618645 32623043 ECH
Cca11g01668 11 40745739 40749018 Cca06g01732 06 32618645 32623043 PCT