Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01364 ATGTCTACGGAGAAAGAAACAAACGGACGCTGCCAACTATCGGTGGAAAATGCTATTGATGAAAATGAGAAGAGTCATGGAAGCCTCAATAAGTATGCCTTTGCCTCAGTGATGGCTGCTTCTATTATCTCCACTGTATTTGGTTATGTTGTGGGAGTGATGTCTGGAGCACTGGTATTTATAAAGGAAGATCTTCAAATCAGTGACTTGCAAGTGCAGATACTAGCAGGCACCTTACATGCGTGCGCACTACCTGCATGCATGGCTGCCGGAAGAACTTCCGATTACAAAGGTCGCCGCTTCGCCATCATTCTATCTTCCATCATCTTCTCATTGGGTTCCATTCTATTGGCCTATGGTCCATCCTATCTCATCCTCATCATCGGAAACTGCATTCTCGGAATTGCCGTAGGTTTTGCACTCATCATTGCACCAGTTTATTGTGCAGAGATTTCACCTCCTTCCTACAGAGGCTTCCTCACCTCTCTCCCAGAACTTTCCATCAACATAGGGCTCTTGCTTGGCTACGCCTCAAACTACTTCTTAGAAAAATTGTCCCTCAAACTTGGATGGAGGATGATGCTTGGTGCTCCTACAGTTCCTAGTCTTGCCCTAGCCATTCTCATGCTGAAATTGGTGGAGTCTCCAAGGTGGTTAATCATGCAGGGACGTGTAGGTGAGGCCAGGAAAGTGCTTTTACTAGTCTCTAACACTAAGGAAGAAGCTGAACAACGGTTGAAGGAAATAAAAGTTGCTGTTGGCATTGATGAAAACTGTGCCCTAGACATTGTTCAGGTTTCAAGGAAAAGTCGCAGTGGTGGGGGGGCTCTGAAGGAACTGTTTTGTAAACCTTCACCACCTGTGCGTAGGATACTGATTGCAGCGATTGCAATTCATGCGTTCTTGCAGTTGGGAGGAATCGGGGCTATTTTGTTATACAGTCCAAGAATCTTTGAGAAAACAGGAATCACTGACAAGAGCATGCTCATGCTAGCCACGGTTGGTATTGGAGTCAGCAAAGTTATATTTTCATTTGTATCAATATTTTTATTGGATAAAGTTGGGAGGAGGATTCTCTTGCTGGTTAGTGCAGTAGGTATGGTTGTGACCTTGTTAGGGTTAGGTATTTGCTTGACCATAGTGGAGCGATATTCCACTGAAAGAGAAGTGTGGGCGATAAACTTTACCATTATTGTTACCTACGTCCTTGTGGCTTTTATGACAATTGGAATTGGGCCAGTGACATGGGTTTATAGTGCAGAGATTTTTCCCTTGAGGTTTAGGGCACAAGGTCTTGCTGTCTGTGTGGCCGTGAACAGAATTGCAAATCTGATAATCATTACAAGTTTCATTTCAATTTATAAAGCGATTACAATGGGTGGGCTTTTCTTCTTGCTTGCTGCTATTAATGCTTTGGCTTTGTGGTTCTACTACACCTTGCCTGAAACTAAAGGAAGATCTTTAGAAGACATGGAGACTATCTTTGGGGGAAATTCCAAGTTGGAGATATAA 1512 0.4358 MSTEKETNGRCQLSVENAIDENEKSHGSLNKYAFASVMAASIISTVFGYVVGVMSGALVFIKEDLQISDLQVQILAGTLHACALPACMAAGRTSDYKGRRFAIILSSIIFSLGSILLAYGPSYLILIIGNCILGIAVGFALIIAPVYCAEISPPSYRGFLTSLPELSINIGLLLGYASNYFLEKLSLKLGWRMMLGAPTVPSLALAILMLKLVESPRWLIMQGRVGEARKVLLLVSNTKEEAEQRLKEIKVAVGIDENCALDIVQVSRKSRSGGGALKELFCKPSPPVRRILIAAIAIHAFLQLGGIGAILLYSPRIFEKTGITDKSMLMLATVGIGVSKVIFSFVSIFLLDKVGRRILLLVSAVGMVVTLLGLGICLTIVERYSTEREVWAINFTIIVTYVLVAFMTIGIGPVTWVYSAEIFPLRFRAQGLAVCVAVNRIANLIIITSFISIYKAITMGGLFFLLAAINALALWFYYTLPETKGRSLEDMETIFGGNSKLEI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01364 503 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 23 500 IPR045262 GO:0015144
Cca06g01364 503 Pfam Sugar (and other) transporter 38 495 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca06g01364 503 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 23 500 - -
Cca06g01364 503 PRINTS Sugar transporter signature 44 54 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca06g01364 503 PRINTS Sugar transporter signature 127 146 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca06g01364 503 PRINTS Sugar transporter signature 302 312 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca06g01364 503 PRINTS Sugar transporter signature 397 418 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca06g01364 503 PRINTS Sugar transporter signature 420 432 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca06g01364 503 ProSitePatterns Sugar transport proteins signature 2. 132 157 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cca06g01364 503 Gene3D MFS general substrate transporter like domains 26 500 IPR036259 -
Cca06g01364 503 ProSitePatterns Sugar transport proteins signature 1. 347 364 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cca06g01364 503 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 490 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca06g01364 503 SUPERFAMILY MFS general substrate transporter 23 492 IPR036259 -
Cca06g01364 503 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 485 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01364 Cca-Chr6 28483428 28487524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01364 16 495 Organic Solute Cotransporters AT2G18480 53.638 2.37e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01364 - - gmx:100786855 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01364 06 28483428 28487524 Cca11g01201 11 30228986 30231848 PCT