Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00815 ATGACCGAACAACTCACGCTCCTCTGTCTCTTTATCCTCTTCTCCTCATCTCTCAGTGTGGGGCACGCCGGCGCCGGCGCGGCGGAGAAAAACCCGTTCACCCCCAAAGCCTTCGCGATTCGGTATTGGGACAAAGAGATCCGCAGCGGGCTCCCCAAGCCCACGTTCCTCGTGTCCAAGGCGTCGCCGCTCAGCGCGGCGGACGCCGCGGCGTTCGTCAAACTCGCCGCCGGCAACGCGCTGTCGACCAAGCTCCCGGAATTCTGCGCCGCCGCGAAGCTCCTCTGCTTCCCGGAGGTGGGGTCCAGCCTCGAGAAGCACGATAAAGACGCGAACTTTGCCGTCTACAGAGACAAGAACTTCACGAACTACGGAACGGGTCGACCCGGTGGGGTCGACTCGTTCAAAAACTACTCCGAGGGAGAGAATATTCCGGTGAACGATTTCCGGCGCTACAGCCGGAACTCCGCGGGGCATAAAGACAATTTCCTCAGCTACGGCTCCAACGGGAACGTGGTGGAGCAGAGCTTCCACACTTACGCCACCGGAGCCACCGGCGGCGGCGGCGAGTTCAAGAAGTACACCGACGACACCAACGTCCCGGACCTCCGGTTCACCTCCTACTCCGACGCCGCCAACGGGAGAACCCAGTCCTTCTCCTCGTACTCCGAAAACGGCAATGGCGGCGACCAGTCCTTCACCTCGTACGGCAAAAACGGCAACGGCCCCAAAAACCTGTTCTCCTCGTACGGGACAGAGTCCAACGTTGTCGGGTCCGGATTCTCCAACTACGCCGAAACCTCGAACGCCGCCAACGACACTTTCAAAAACTACGGCGTGGACATGAACAACCCCACCAACACATTCTCCAACTACGCCGGCGGCGGAAACGGCGCCGCGGAGAGATTCTCGAACTACCGCGACAAGGCCAACGTGGGCGCCGACTCCTTCTCCTCGTACGCGAAGTCCTCCAACGCCGCCGACGTGGGTTTCTCAAACTACGGGAAGTCCTTCAACGAGGGGACGGACACGTTCTCCTCGTACGCGAAGTCCTCGAACGGCGAGACGAAGGTGGGTTTCTCCTCGTACGGCGTGAACAACACGTTCAAGGAATATTCTAAAGAAGGCGCAGCCATCTCCTTCGCCAAGTACACCAATGTGAGCTCGAGCCTCTCGGTTTCAGCGGTGAGTGGCAGTTTCGTGAATAAGTGGGTGGAGCCGGGGAAGTTCTTCCGCCAGAAGATGATGAAGGAAGGGACGGTGATGCCCATGCCCGACATAAGAGATAAAATGCCCGAAAGGTCCTTTTTGCCCCGGACCATTTTGTCCAAATTACCCTTTTCCGTTTCCAAAATCGACGAGCTCAAACGGGTTTTCCGGGCCTCGGATAACGGGTCCATGGAGCGGCTCATGCGTGAGTCGCTGGAGGAGTGCGAGCGGGCCCCCAGTCGCGGCGAGACCAAGCGGTGCGTGGGCTCGCTCGAGGACATGATCGATTTCGCCACCTCCGTTTTGGGCCGCAACGTCGCCGTTCGGAGTACCCAAAACGTTAACGGGTCCAAGAAAAATGTGATGGTGGGCCACGTTAGTTCAATCAACGGTGGTAGAGTCACCCAATCCGTGTCTTGCCACCAGAGCCTCTTTCCTTACCTGTTATATTACTGCCACGCGGTTCCTAAGGTTCGGGTCTACCAAGCGGATCTTCTTGACCCGAAAACCAAGGCCCATATCAACCACGGTGTCGCCATTTGTCATTTGGACACCTCGGATTGGAGCCCCACCCACGGAGCCTTTCTCTCACTCGGGTCGGGTCCGGGTAGGATCGAGGTTTGCCATTGGATCTTCCAGAACGACATGGTGTGGACCATTGCCGATTGA 1878 0.5836 MTEQLTLLCLFILFSSSLSVGHAGAGAAEKNPFTPKAFAIRYWDKEIRSGLPKPTFLVSKASPLSAADAAAFVKLAAGNALSTKLPEFCAAAKLLCFPEVGSSLEKHDKDANFAVYRDKNFTNYGTGRPGGVDSFKNYSEGENIPVNDFRRYSRNSAGHKDNFLSYGSNGNVVEQSFHTYATGATGGGGEFKKYTDDTNVPDLRFTSYSDAANGRTQSFSSYSENGNGGDQSFTSYGKNGNGPKNLFSSYGTESNVVGSGFSNYAETSNAANDTFKNYGVDMNNPTNTFSNYAGGGNGAAERFSNYRDKANVGADSFSSYAKSSNAADVGFSNYGKSFNEGTDTFSSYAKSSNGETKVGFSSYGVNNTFKEYSKEGAAISFAKYTNVSSSLSVSAVSGSFVNKWVEPGKFFRQKMMKEGTVMPMPDIRDKMPERSFLPRTILSKLPFSVSKIDELKRVFRASDNGSMERLMRESLEECERAPSRGETKRCVGSLEDMIDFATSVLGRNVAVRSTQNVNGSKKNVMVGHVSSINGGRVTQSVSCHQSLFPYLLYYCHAVPKVRVYQADLLDPKTKAHINHGVAICHLDTSDWSPTHGAFLSLGSGPGRIEVCHWIFQNDMVWTIAD 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00815 625 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 8 625 - -
Cca06g00815 625 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 8 625 - -
Cca06g00815 625 MobiDBLite consensus disorder prediction 216 238 - -
Cca06g00815 625 Pfam BURP domain 410 622 IPR004873 -
Cca06g00815 625 ProSiteProfiles BURP domain profile. 410 624 IPR004873 -
Cca06g00815 625 SMART BURP_2 408 624 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00815 Cca-Chr6 21160505 21162485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00815 - - gmx:100797939 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00815 06 21160505 21162485 Cca06g00815 06 21160505 21162485 ECH
Cca06g00815 06 21160505 21162485 Cca11g00676 11 11261214 11263549 PCT