Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02017 ATGGATCAACTCAAAAACCAAAATGTAGAAACCTTGACTCACAACATAAAAGCTCATAACTATCTAGTGAAGCTTACACAATTATTCGTTTCAGTATCcctttgttccttcatcttctcgccttcttccttccttcttttcttcCATTACATCAAATTCTATTTCTCAACATTCCCTTTCCAACTCTACACCCACAACATAGACAAAAACTGCATGTTTCTCCTTTGCAATGGTCTCCTTGTTTTTGTTGGCATAACTAGATCTCTCTCAGGGTCTAATTGTGATGAAAAGACTTCTACGTATATTAAAGATGGTTCACATTCACAGTCTCACTTCTCAGTTATTGAAACCAACGAGCTAATGTTAGAGATAGTAGAAACCGAGGAGAAAAGTAGTGAGCATGATGAACAGAACATTGCAGCAGAACAAGTAATAGAAATAGAAACCTGTGCTGAAGAAGTGCAAGAAGACATTGAGAAGATAATTTTGGTAGATGAAGGACAAGAGAAAGGAAGTAGCCTAGTTTTGAAAGAAGAGGAGGAGCTAGATGAAGAAACTGAATTATTGGATGTAGGTCATgaagatgaagaagaagaagaCAAAGGGTCAGAATTTGATTACTTTCTGATTGAAGAGAGCATGgaagaggaagaagaaaatgtagaagaagaagaagaaTGCTGTATGTTGAGCACAGAGGAGTTGAACAGAAAAGTTGAAGATTTCATTAGAAAGATGAAGGAAGATCTAAGAATTGAAGCTCAACGGCAATTAGTCATGGTTTGA 786 0.3181 MDQLKNQNVETLTHNIKAHNYLVKLTQLFVSVSLCSFIFSPSSFLLFFHYIKFYFSTFPFQLYTHNIDKNCMFLLCNGLLVFVGITRSLSGSNCDEKTSTYIKDGSHSQSHFSVIETNELMLEIVETEEKSSEHDEQNIAAEQVIEIETCAEEVQEDIEKIILVDEGQEKGSSLVLKEEEELDEETELLDVGHEDEEEEDKGSEFDYFLIEESMEEEEENVEEEEECCMLSTEELNRKVEDFIRKMKEDLRIEAQRQLVMV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02017 261 PANTHER TRANSMEMBRANE PROTEIN 3 261 - -
Cca05g02017 261 Coils Coil 214 234 - -
Cca05g02017 261 PANTHER PROTEIN, PUTATIVE-RELATED 3 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02017 Cca-Chr5 40020208 40021268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02017 - - gmx:100776851 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02017 05 40020208 40021268 Cca05g02017 05 40020208 40021268 ECH
Cca09g01211 09 34125546 34126654 Cca05g02017 05 40020208 40021268 PCT
Cca05g02017 05 40020208 40021268 Cca09g00742 09 21687331 21696120 PCT