Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01699 ATGGAGAACTTTCCCGTGATCAACTTGGAGAATCTCAACGGTGAAGAGAGGAAAGCCACATTGGAGCAGATTGAAGAGGCTTGCCGGAACTGGGGATTTTTTGAGTTGGTGAATCATGGAATACCCCATGAACTTTTGGATACGTTGGAAAGGTTAACAAAAGAGCATTATAGGAAATGCATGGAGAAGAGGTTCAAGGAGGCAGTGGCAAGTAAGGGGTTAGAGGATTTCCAAGCTGAACAAAAGGACATGGATTGGGAGAGTACCTTCTTCTTGCGCCATCTCCCAACCTCCAACATCTCTCAAATCCCAGATCTCAGCCAAGAGTACCGGGAGGCAATGAGAGAATTTGCACAGAAATTGGAGAAACTTGCAGAAGAGTTGTTAGACCTGTTATGTGAAAATATTGGATTAGAGAAAGGGTACTTGAAGAAGGCGTTTTATGGATCAAGGGGTCCAAATTTTGGTACAAAGGTGGCAAACTACCCTCCGTGTCCAAAGCCAGAGTTGGTGAAGGGTCTTCGGGCTCATACTGATGCAGGTGGGATTATCCTTCTCTTGCAAGATGATAAGGTCAGTGGCCTTCAGCTTCTCAAAGATGACCAATGGGTCGATGTACCTCCAATGCGCCATTCCATTGTTGTTAACCTTGGTGACCAAATTGAGGTAATCACCAATGGGAAATACAAGAGTGTGGAGCATCGTGTGATTGCTCGAACTGATGGGACCAGAATGTCCGTAGCCTCATTCTACAACCCTGCTAGTGATGCTGTTATCTACCCTGCACCAGCATTGTTGGAGAGAGAGGCAAAGGAGAATGACCAAGTATACCCAAAATTTGTGTTTGAGGATTACATGAGGCTCTATGCTAAACTAAAGTTCCAGCCAAAGGAGCCAAGATTTGAAGCCATGAAGACAGTGAACTCATTTTAG 933 0.4502 MENFPVINLENLNGEERKATLEQIEEACRNWGFFELVNHGIPHELLDTLERLTKEHYRKCMEKRFKEAVASKGLEDFQAEQKDMDWESTFFLRHLPTSNISQIPDLSQEYREAMREFAQKLEKLAEELLDLLCENIGLEKGYLKKAFYGSRGPNFGTKVANYPPCPKPELVKGLRAHTDAGGIILLLQDDKVSGLQLLKDDQWVDVPPMRHSIVVNLGDQIEVITNGKYKSVEHRVIARTDGTRMSVASFYNPASDAVIYPAPALLEREAKENDQVYPKFVFEDYMRLYAKLKFQPKEPRFEAMKTVNSF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01699 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 95 IPR026992 -
Cca05g01699 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 153 253 IPR005123 -
Cca05g01699 310 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-LIKE 2 306 - -
Cca05g01699 310 Coils Coil 107 134 - -
Cca05g01699 310 Gene3D - 1 310 IPR027443 -
Cca05g01699 310 SUPERFAMILY Clavaminate synthase-like 3 305 - -
Cca05g01699 310 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 306 - -
Cca05g01699 310 Pfam 2OG-Fe(II) oxygenase superfamily 159 253 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01699 Cca-Chr5 36475285 36477005 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01699 4 291 Glycosyltransferase AT5G59530 31.894 8.36e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01699 K05933 - gmx:100792063 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01699 05 36475285 36477005 Cca05g01699 05 36475285 36477005 ECH
Cca05g01699 05 36475285 36477005 Cca01g00227 01 2362333 2362956 PCT