Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00227 ATGGTGAGTGAGAATGGGAAGAATGAGAATGAGTCATCAAAAATGTCTTTCAGAATAACAAAAGATGACAGGTTCTTCTCAAGGCTTTTGGCGAAGGAAAGGTCGAGCCTGAACTCTTCCTCAAGGATCTTCTACTACGGAGAAACTTCAGTGGCAGTACCCTTCACGTGGGAGGCACAACCTGGAACCCCCAAACACCCCTTGTCAGAGACCTCTCTCCCTCCCCTCACACCTCCACCTTCCTATTTCCCAAGCCCCAATAAGTCCCACATCGCTGCAAACCCAAGAAATCCCAAGTCCAATAACAATATATTCTCATGCATTTTGCCAAAGCTTGTCAAGTCTCATCATGTGTCACCATCTTGGTCAACCtcatcttcttcttcttcttgctccttGGTGTATTATTCATCGTCCACCGAGTTCAACAAAGATCAAGGAACAAACTCTTTGAAACGCAAGTGTTATCGTCGAATATTTGGAGGCTGCTTTTCCTTTGGGAACACTAGTTGCTATGTGTATTTTGGGAGATGTTAA 537 0.4264 MVSENGKNENESSKMSFRITKDDRFFSRLLAKERSSLNSSSRIFYYGETSVAVPFTWEAQPGTPKHPLSETSLPPLTPPPSYFPSPNKSHIAANPRNPKSNNNIFSCILPKLVKSHHVSPSWSTSSSSSSCSLVYYSSSTEFNKDQGTNSLKRKCYRRIFGGCFSFGNTSCYVYFGRC 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00227 178 PANTHER - 6 154 - -
Cca01g00227 178 PANTHER OS05G0165500 PROTEIN 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00227 Cca-Chr1 2362333 2362956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00227 - - gmx:100526978 147.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01699 05 36475285 36477005 Cca01g00227 01 2362333 2362956 PCT