Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01632 ATGAAGGCACCATTCTCAACCCCTTCTTCCCTTCTCAAAGGCAAAGGTCGTCTCTCTCCGTACCTTCTCACCCTCATACTTTTCATCCTCTTTGTCGCCATCCTCTATGGCCAGGACTTCATGTGCATCTTCGGCCAACAACTCCAAAACTACTCTTACCCCGACAAAATCTCCTCCTCCTCAACCGAGAGGGTGAAGCGGCATAAGGTGCCGTTTACGGTGGGAAAGGCGGAGGAAGGGTGTGACGTGTTCAGCGGAAGGTGGGTTCGGGACGAGTTGAGTCGACCGTTGTACGAGGAATCGGAGTGTCCGTACATTCAGCCGCAATTGACATGTCAAAAACATGGACGACCCAACAAGGATTACCAGCATTGGAGGTGGCAACCACACGGTTGCGATCTTCCCAAATTCAATGCCAGTTTGGTGCTTGAAACACTTCGTGGAAAAAGGATGATGTTTGTTGGCGATTCTCTTAATCGTGGTCAATATGTATCTTTTGTATGTCTTATCCATCGACTCATTCCCGAAGATGCCAAATCAATGGAAACTTTTGATTCACTCACTGTATTTACAGCCAAGGATTACAATGCCACAATTGAGTTCTACTGGGCACCTTTTCTTCTTGAATCAAATTCAGACGATGCTGTCATTCATAGGATATCTGATAGGATTGTCAGAAAAGGTTCAATCAATAAGCATGGCAGAAATTGGAAAGGTGTTGATATTTTGGTATTCAACACCTATCTTTGGTGGATGACTGGCTTGAAGATGAAAATCTTGCTTGGATCTTTCGATGATGAAGCGAAAGAGATTGTTGAACTCTCAACAGAGGATGCTTATCGTATGGCTATGAAAAGCATGCTTAGATGGGTGAGGTTGAATATGGATCCAAAGAAAACTAGAGTCTTCTTCACAAGCATGTCACCTTCACATGGAAAAAGCATAGATTGGGGAGGTGAAGAAGGAGGAAATTGTTACAATGAAACAACTCTAATCGATGATCCAACATATTGGGGCTCTGATTGCAGGAAGAGCATAATGGAAGTAATAGGAGAAGTGTTTAGCAAAACCAAAGTGCCCATTACATTTTTGAACATCACACAACTTTCTAGTTACCGTAGAGATGCACATACTTCAATATACAAGAAGCAATGGAGCCCGTTGACTCCAGAGCAATTAGCTAACCCTGTTAGCTATGCTGATTGTGTGCACTGGTGTTTGCCTGGCCTTCAAGACACTTGGAATGAACTTTTATTTACCAAGTTGTTTTATGCTTGA 1278 0.4335 MKAPFSTPSSLLKGKGRLSPYLLTLILFILFVAILYGQDFMCIFGQQLQNYSYPDKISSSSTERVKRHKVPFTVGKAEEGCDVFSGRWVRDELSRPLYEESECPYIQPQLTCQKHGRPNKDYQHWRWQPHGCDLPKFNASLVLETLRGKRMMFVGDSLNRGQYVSFVCLIHRLIPEDAKSMETFDSLTVFTAKDYNATIEFYWAPFLLESNSDDAVIHRISDRIVRKGSINKHGRNWKGVDILVFNTYLWWMTGLKMKILLGSFDDEAKEIVELSTEDAYRMAMKSMLRWVRLNMDPKKTRVFFTSMSPSHGKSIDWGGEEGGNCYNETTLIDDPTYWGSDCRKSIMEVIGEVFSKTKVPITFLNITQLSSYRRDAHTSIYKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFYA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01632 425 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 10 424 - -
Cca05g01632 425 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 424 IPR029962 GO:0016413
Cca05g01632 425 Pfam PMR5 N terminal Domain 80 133 IPR025846 -
Cca05g01632 425 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 134 420 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01632 Cca-Chr5 35734537 35738398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01632 - - gmx:100785571 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01632 05 35734537 35738398 Cca05g01632 05 35734537 35738398 ECH
Cca01g00257 01 2672924 2689135 Cca05g01632 05 35734537 35738398 PCT