Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01625 ATGGCACTAGTTGAAGACTTCTTCAAGGAAAGGAAATACCCTTTCATTTTCACTCTCTTTATCTTACTCATTTGCGTCACGCTCTTCCTCTTCACCAATTCCACCTCAAACCCTGTCGCTTTCTACTCTGTTATCCAAGAGCAACCACCCCTCGGCACTTCTCAAGCACCTCCTGAGTACACTGCAAATCCAAAAGAGCAAAAGCTACCCACAAACGTGACCAATGTCTCAACCGAGAAGGACCAAATTTTGCCCCAAAATGAGGAGTCAGAGAAGATCGAGTGGAAGCTATGTGAAGACCCTGTGAATGTTGATTTTATTCCCTGTTTGGATAATTTTATGGCGATTAAGGCTCTGAAGTCGAGGAGGCACATGGAGCACCGGGAAAGGCATTGTCCTGAGACTAGTCTGCATTGTTTGCTGCCCCTTCCTAAAGGGTATAAAGTCCCAGTTCCCTGGCCTAAGAGCAGGGACAAGATTTGGTATGATAACGTCCCCTATCCGAAGCTGGTGGAGTACAAGAAAGACCAACACTGGGTAGTCAAGTCTGGGAAATATCTGGTCTTTCCTGGTGGTGGTACTCAATTCAAAGATGGAGTTGATCATTATATTGAGTTCATAGAGAAGACTTTACCAGCAATAAAATGGGGAAAGCATACCAGGGTTGTTCTAGATGTTGGCTGTGGAGTTGCTAGCTTCGGTGGCTATCTGCTGGACAAAAATGTTATTACTATGTCATTTGCCCCAAAAGATGAACATGAAGCTCAGATACAATTTGCTTTGGAACGAGGAATTCCTGCAACTCTTTCTGTCATTGGAACACAAAAGTTGACTTTTCCTGATAATGGATTTGATATGATCCATTGTGCACGATGCAGGGTTCACTGGGATGCAGATGGTGGGAAGCCCTTGTATGAGCTCAATAGGGTTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCAACACCAGTTTACCGTGATGATGAAAGAGATCAACAAGTATGGAATGCCATGGTGGCTATAACAAAAGCTATGTGCTGGAAGGTTGTGGCTAAGGCTAGTGATTCATCCGGAATTGGGCTTGTTATATACCAGAAGCCTACCTCATCTTCTTGCTATAAGAAACGTAAAGAGAACAATCCACCTTTATGTGAAAATCAGGATGGGAAGAATAGCTCATGGTATGCCAGACTCAATAGCTGCCTTACTCCTCTTCCGGTTGATGGAATGGGTAACATTCAAAGTTGGCCCAAGCCTTGGCCCCAGAGGCTTACCAGTAAGCCCCCTAGTTTACCTTCTGATTCAGATGCGAAAGACAAGTTCTTTAAGGACAGCAAACACTGGTCTGAATTAGTTTCAAATGTTTATTTGGATGGTCTTCCTATAAAGTGGTCGAGTCTTCGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCCGCGGCTCTCGTTGATCTACCAATCTGGGTGATGAATGTAGTACCTATTGATGTGCCAGATACTCTTTCTATTATAATGGACAGAGGGCTAATAGGAATGTATCATGATTGGTGCGAGTCCTTTAACACCTATCCTCGCACATACGATCTTCTTCATTCTAGCTTTCTTTTCAAATATCTTGAGCGAAGATGTGACATTGTAGATGTGGCTGTGGAGATTGATCGCATATTGAGACCAAATGGATATCTCGTGGTTCACGATTCTACGGAAATACTTAACAAGCTCGTTCCGATCTTGAGTTCACTTAACTGGTCTGTAACGTTGCATCAGGATCAGTTTCTTGTGGGTAGGAAGGGTTTCTGGCGTCCTATGAGTTCTTGA 1824 0.4364 MALVEDFFKERKYPFIFTLFILLICVTLFLFTNSTSNPVAFYSVIQEQPPLGTSQAPPEYTANPKEQKLPTNVTNVSTEKDQILPQNEESEKIEWKLCEDPVNVDFIPCLDNFMAIKALKSRRHMEHRERHCPETSLHCLLPLPKGYKVPVPWPKSRDKIWYDNVPYPKLVEYKKDQHWVVKSGKYLVFPGGGTQFKDGVDHYIEFIEKTLPAIKWGKHTRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDMIHCARCRVHWDADGGKPLYELNRVLRPGGFFAWSATPVYRDDERDQQVWNAMVAITKAMCWKVVAKASDSSGIGLVIYQKPTSSSCYKKRKENNPPLCENQDGKNSSWYARLNSCLTPLPVDGMGNIQSWPKPWPQRLTSKPPSLPSDSDAKDKFFKDSKHWSELVSNVYLDGLPIKWSSLRNVMDMNAGYAGFAAALVDLPIWVMNVVPIDVPDTLSIIMDRGLIGMYHDWCESFNTYPRTYDLLHSSFLFKYLERRCDIVDVAVEIDRILRPNGYLVVHDSTEILNKLVPILSSLNWSVTLHQDQFLVGRKGFWRPMSS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01625 607 CDD AdoMet_MTases 223 317 - -
Cca05g01625 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 3 607 IPR004159 GO:0008168
Cca05g01625 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 452 571 IPR029063 -
Cca05g01625 607 Gene3D Vaccinia Virus protein VP39 196 388 IPR029063 -
Cca05g01625 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 105 593 IPR004159 GO:0008168
Cca05g01625 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 338 IPR029063 -
Cca05g01625 607 PANTHER PMT16, PUTATIVE-RELATED 3 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01625 Cca-Chr5 35663291 35668198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01625 - - gmx:100800390 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00265 01 2798151 2803525 Cca05g01625 05 35663291 35668198 PCT