Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01622 ATGTGGCCACCGTGGCTCAATTCACCCAACCGGTTCCGCAACACTCCACCGccgtcaccttcgccgtcacaAGCCTCCTCCAAGACAAGCCCGAGCCCGCCGCTCCCAAATCCCCGCCGCGTCCGGATCTccaccgccgtcctccgcgccctcggcgcctcacgcgccgcctcccccgccgcATTGCCGCCCGGCCTCGACCAAGGCGTCGTCGTCTACTTCACCTCCCTCCGCGTCGTCCGCCGCACCTTCGACGACTGCCGCGCCGTACGATCCATCCTCCGCGGCCTCCGCGTCGCCGTCGACGAGCGCGACGTCTCCATCGACGACCGCTTCCGCGACGAGCTCCACGGGATCCTCGGCCGCCGCAGCGTTGCGCTGCCGCGCGTCTTCATCGGCGATGgttacactttttaa 417 0.5492 MWPPWLNSPNRFRNTPPPSPSPSQASSKTSPSPPLPNPRRVRISTAVLRALGASRAASPAALPPGLDQGVVVYFTSLRVVRRTFDDCRAVRSILRGLRVAVDERDVSIDDRFRDELHGILGRRSVALPRVFIGDGYTF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01622 138 PANTHER GLUTAREDOXIN (GRX) FAMILY PROTEIN 38 136 - -
Cca05g01622 138 PANTHER GLUTAREDOXIN (GRX) FAMILY PROTEIN 3 29 - -
Cca05g01622 138 SUPERFAMILY Thioredoxin-like 68 136 IPR036249 -
Cca05g01622 138 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 3 29 - -
Cca05g01622 138 MobiDBLite consensus disorder prediction 1 38 - -
Cca05g01622 138 Pfam Glutaredoxin 71 134 IPR002109 -
Cca05g01622 138 ProSiteProfiles Glutaredoxin domain profile. 58 138 - -
Cca05g01622 138 MobiDBLite consensus disorder prediction 1 39 - -
Cca05g01622 138 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 38 136 - -
Cca05g01622 138 Gene3D Glutaredoxin 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01622 Cca-Chr5 35649374 35649872 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01622 K17479 - gmx:100816516 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00266 01 2809713 2810662 Cca05g01622 05 35649374 35649872 PCT