Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00266 ATGCTTTCAATGTGGCTACCATGGCCGGTCCGAACCACGAGGCGCACAGCCCGATCCCGATCCAGCAGCGCCACCTGCTCCTCCTTCAAAGACATCCAAACCATGCTCCAAACCGAATCCGAACCTACCTCGCCCAAATCTCCCTCCCTCTTCCGCCGCCTCTCCGTCTCCCCCTCCCTCCTCCGCTCCGTTAGCTCCCGCTCCTCCGTCTCCCTCCCGCCGCCCTCCGACCACCACGCCGCCGCCGTCGTCGTCTACTACACCAGCCTCCGCGTCGTCCGCCGCACCTACGACGACTGCCGCGCCGTCCGCTCTATTCTCCGTGGTTTTGCCGTCGCCGTGGACGAGCGCGACGTCAGCGTGGACGAGCGCTTCCGCGAGGAGCTCCAGGCGGTCCTCGGGCGGCGCCACGTGGCGCTGCCGAGCGTCTTCGTCGCGGGCGCGTATGTGGGCGGCGCGGACGACGTGAGGAAGCTTTACGACAGCGGCGAACTGCAGGAAGTGATCGGACGGCTGCCGAGGTCGCAGCGCATCATGTGCGATCTGTGCGGAGGGCTGAGATTCGTGGTGTGCGACGAGTGCGACGGAAGCCACAAAGTAAGAGCGGTGGATTCAGAATGTGCTCCTCTTGCAACTCCAACGGTTTGA 648 0.6528 MLSMWLPWPVRTTRRTARSRSSSATCSSFKDIQTMLQTESEPTSPKSPSLFRRLSVSPSLLRSVSSRSSVSLPPPSDHHAAAVVVYYTSLRVVRRTYDDCRAVRSILRGFAVAVDERDVSVDERFREELQAVLGRRHVALPSVFVAGAYVGGADDVRKLYDSGELQEVIGRLPRSQRIMCDLCGGLRFVVCDECDGSHKVRAVDSECAPLATPTV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00266 215 Pfam Glutaredoxin 84 150 IPR002109 -
Cca01g00266 215 Gene3D Glutaredoxin 77 171 - -
Cca01g00266 215 SUPERFAMILY Thioredoxin-like 80 170 IPR036249 -
Cca01g00266 215 ProSiteProfiles Glutaredoxin domain profile. 71 176 - -
Cca01g00266 215 PANTHER GLUTAREDOXIN (GRX) FAMILY PROTEIN 6 202 - -
Cca01g00266 215 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 6 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00266 Cca-Chr1 2809713 2810662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00266 K17479 - gmx:100807688 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00266 01 2809713 2810662 Cca05g01622 05 35649374 35649872 PCT