Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01596 ATGACCTCCTTCTATTCGACCGCCAAATCCAGAACGGAAGAAGACCCATCCGTCAGCGAAGACGACGGTGAGGATGGCGGCGACACCGCAGTGTGGGGAGCGTTCAGCGAAAGCCTCCGCGAGGTGCAGTCGGTGCTGGACCGTAACCGGTTCCTGATCAAGCAGGTGAACGAGAACCAACACTCTAGGCTCCGCGACAACATGCTGAAGAACGTCTCCCTCATTCAGGAACTCAACGGTAACATCTCCAAAGTTCTCTCTCTCTATTCCCATATCAACTCCAATTTCTCCACCGCCTTCCAACAACATCCCGCCACCGACGCCGCACGTGACAAATCGTGA 342 0.5526 MTSFYSTAKSRTEEDPSVSEDDGEDGGDTAVWGAFSESLREVQSVLDRNRFLIKQVNENQHSRLRDNMLKNVSLIQELNGNISKVLSLYSHINSNFSTAFQQHPATDAARDKS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01596 113 MobiDBLite consensus disorder prediction 1 30 - -
Cca05g01596 113 PANTHER PROTEIN EARLY FLOWERING 4 12 107 - -
Cca05g01596 113 Pfam Early Flowering 4 domain 27 106 IPR009741 -
Cca05g01596 113 PANTHER PROTEIN ELF4-LIKE 4 12 107 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01596 Cca-Chr5 35255078 35255760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01596 - - ccaj:109790811 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01596 05 35255078 35255760 Cca05g01596 05 35255078 35255760 ECH
Cca01g00299 01 3202984 3203641 Cca05g01596 05 35255078 35255760 PCT