Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00299 ATGAACTCATCCTCCTCCGCCGCAGAGTCCACCATGGAAGACCCATCCTCCGGCCACCGCCGCTCCAAGAAGCACCACCGCAGCCACCGTCACCGCCCCTCGACGACGGCGGAGGAGTCGGACGGCGAGGTGGATGAGGGCGACCCGGAGGCGTGGGCCACCCTGAACAAGGGGTTCCGGCAGGTGCAGTCGGTGCTGGACCGTAACCGGCTACTGATTCAGCAGGTGAACGAGAACCAGCAGTCTCGGATGCACGACAACATGGTCAAAAACGTCTCCCTTATTCAGGAACTCAACGGGAACATCTCCAAGGTTGTCTCTCTCTACTCTGATCTCAACACCAATTTCACCAACGTTTGCCAACACCGCTCCAAAAACTCTTCCAAATAA 390 0.5821 MNSSSSAAESTMEDPSSGHRRSKKHHRSHRHRPSTTAEESDGEVDEGDPEAWATLNKGFRQVQSVLDRNRLLIQQVNENQQSRMHDNMVKNVSLIQELNGNISKVVSLYSDLNTNFTNVCQHRSKNSSK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00299 129 Pfam Early Flowering 4 domain 47 126 IPR009741 -
Cca01g00299 129 PANTHER PROTEIN EARLY FLOWERING 4 17 126 - -
Cca01g00299 129 PANTHER PROTEIN ELF4-LIKE 4 17 126 IPR040462 GO:0042753
Cca01g00299 129 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00299 Cca-Chr1 3202984 3203641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00299 - - gmx:100796686 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00299 01 3202984 3203641 Cca05g01596 05 35255078 35255760 PCT